Pairwise Alignments

Query, 259 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 262 a.a., ABC-2 type transporter (RefSeq) from Shewanella loihica PV-4

 Score =  308 bits (790), Expect = 6e-89
 Identities = 147/249 (59%), Positives = 196/249 (78%)

Query: 11  ALQTIVYREVKRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMEYIVPGLI 70
           A ++I+ +EV RFTRIW QTL+PPAI+M LYF+IFGNL+G++IG+MGG +YME+I PGLI
Sbjct: 14  AFKSILIKEVTRFTRIWVQTLVPPAISMTLYFLIFGNLVGKRIGEMGGVSYMEFIAPGLI 73

Query: 71  MMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTLGGVLRGLMVGVIVTLL 130
           MMSVIT SY NV SSFF +KFQR++EEL+V+PV  + ++ GY  GGV RGL VG IVTL+
Sbjct: 74  MMSVITASYSNVASSFFSAKFQRNLEELIVAPVPHYVMIAGYVGGGVARGLCVGTIVTLV 133

Query: 131 SLFFTHLQVHHLGVTILVVVLTATIFSLLGFINAVFARNFDDISIIPTFVLTPLTYLGGV 190
           ++FF  + +HH G+  L V+LT+ +F+L G INAVFA+++DDISI+PTFVLTPLTYLGGV
Sbjct: 134 AMFFVDISLHHAGLVALTVLLTSILFALGGLINAVFAKSYDDISIVPTFVLTPLTYLGGV 193

Query: 191 FYSISLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIKISVAITFMLVATVVLYIGCAKL 250
           FYS++LLP FWQ VS  NPV++M+N FRYG LG +DI I +++  M+     L++    L
Sbjct: 194 FYSLTLLPSFWQGVSQLNPVVYMINVFRYGFLGYADISIGLSVAIMVGFCAGLWLVAYYL 253

Query: 251 LVSGRGMRT 259
           +  G G+RT
Sbjct: 254 ISRGIGLRT 262