Pairwise Alignments

Query, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 493 a.a., Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (336), Expect = 6e-36
 Identities = 104/317 (32%), Positives = 149/317 (47%), Gaps = 15/317 (4%)

Query: 24  TLLALVHAQGEVERLSEREQLLSSMLVSVNAVLWAMDWETRRVLYVSPAYERVFGRSAGL 83
           T+  L+      ER   R Q ++ M  +    LW +D   R  ++ S     + G     
Sbjct: 163 TIAGLIAGSIHRERQRVRSQQVAVMERTTGGGLWELD-VLRGDVWCSETLFHLLGYPPPC 221

Query: 84  LLADHREWRNSIHPEDLDYAEHSLARVLERGAVEDR-EYRIITADGQIRWLSDKCYINQ- 141
                R     I PED      S  R +  G    R + R    D  + W      + + 
Sbjct: 222 ARLTIRRLLRHILPEDRALVMASARRCMREGLPAFRLDVRAWRHDRTLLWWELIIDVTET 281

Query: 142 RVEPGEPLIVVGMAEDITEKKQMELELHRLATTDVLTQSSNRRHFFECANLAFDTACAKG 201
           R   G PL + G+  ++ ++K  ELEL R A TD LT  +NRR F   A    +     G
Sbjct: 282 RPLDGFPLRMTGIVLEVNDRKTQELELARTAATDPLTGLANRRSFEALATRLLENKPGSG 341

Query: 202 EPLAFLLLDIDDFKDVNDSYGHLEGDQVLRRIAESGRGVLRRGDLFGRIGGEEFAAVLPG 261
                L++DID FK +ND +GH  GD+VLR +A  GR VLR GDL GR+GGEEFA +L  
Sbjct: 342 ---TLLVIDIDLFKHINDCFGHAAGDEVLRHLAIVGRSVLRDGDLIGRLGGEEFAVLLQM 398

Query: 262 CAPEMALQVAERLGREIQEL-----SFSYEGQAFSVTISQGLA---SLTEADSTLDSLFA 313
             PE A  VA+RL + ++E+     S+ +      +TIS G+A      +    L     
Sbjct: 399 DGPE-AYAVADRLCQAVREMAVTAPSWEHSSVVVKITISIGIAHPCPFEDPKFALSEALR 457

Query: 314 RADAAMYEAKRLGKNRV 330
           RAD A+Y AK+ G+N++
Sbjct: 458 RADRALYGAKKRGRNQI 474