Pairwise Alignments

Query, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 519 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  129 bits (323), Expect = 2e-34
 Identities = 87/224 (38%), Positives = 121/224 (54%), Gaps = 7/224 (3%)

Query: 107 LARVLERGAVEDREYRIITADGQIRWLSDKCYINQRVEPGEPLIVVGMAEDITEKKQMEL 166
           LAR ++RG V D E+R+  A G+  W             G+P +++    DIT  KQ E 
Sbjct: 289 LARTVQRGRVLDCEFRLRGAGGEPFWALVSTIAMSY--DGQPAVLLSF-NDITVHKQREE 345

Query: 167 ELHRLATTDVLTQSSNRRHFFECANLAFDTACAKGEPLAFLLLDIDDFKDVNDSYGHLEG 226
              RLA TD LT   NRR  F+   L    A     PL+ L++D+D FK +ND+ GH  G
Sbjct: 346 AWQRLALTDPLTGLGNRRLLFDRGILEVARARRGCWPLSGLMIDLDHFKRINDTQGHAAG 405

Query: 227 DQVLRRIAESGRGVLRRGDLFGRIGGEEFAAVLPGCAPEMALQVAERLGREIQELSFSYE 286
           D +LR +A++ R  LR  D+  R+GGEEFA +LP  +   A +V ERL    Q      +
Sbjct: 406 DAILRTLADTLRESLREIDVIARVGGEEFAILLPDTSLTAAHEVGERLRLSCQ----IPQ 461

Query: 287 GQAFSVTISQGLASLTEADSTLDSLFARADAAMYEAKRLGKNRV 330
                VTIS G+++L   D  L  + +RAD A+Y AKR G++RV
Sbjct: 462 PVGGPVTISVGISTLHPEDRGLGDMLSRADDALYRAKRNGRDRV 505