Pairwise Alignments

Query, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 450 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  140 bits (352), Expect = 8e-38
 Identities = 98/296 (33%), Positives = 145/296 (48%), Gaps = 6/296 (2%)

Query: 34  EVERLSEREQLLSSMLVSVNAVLWAMDWETRRVLYVSPAYERVFGRSAGLLLADHREWRN 93
           E+ERL E E+  ++        +W  + ET  V +    +  +FG +   +   +  +  
Sbjct: 149 ELERLRETEERFNASQRFGRIGVWDWNTETNEVFWSEEVFP-MFGFTPAEITPTYDLFIA 207

Query: 94  SIHPEDLDYAEHSLARVLERGAVEDREYRIITADGQIRWLSDKCYINQRVEPGEPLIVVG 153
            +HP+D      S    L    + D+EYR+I  DG + W+ +   +  R   G P  +VG
Sbjct: 208 MVHPDDFVALTDSERACLSGTTLHDQEYRVIWRDGSVHWIRETADV-LRESDGTPRRMVG 266

Query: 154 MAEDITEKKQMELELHRLATTDVLTQSSNRRHFFEC--ANLAFDTACAKGEPLAFLLLDI 211
           +  ++TE+K+ + +  R+A  D LT   NR  F E   A+L          PLA   +D+
Sbjct: 267 VIREVTEEKEAQRQALRIAMLDPLTGLPNRATFLERLEADLGQVDETGVAVPLALAFIDL 326

Query: 212 DDFKDVNDSYGHLEGDQVLRRIAESGRGVLRRGDLFGRIGGEEFAAVLPGCAP-EMALQV 270
           DDFK +ND+YGHL GD+VL  IA+     +R  D+  R+GG+EF A+L GC     A  V
Sbjct: 327 DDFKPINDTYGHLMGDRVLMTIAKRLSEAVRPQDMVARVGGDEFVALLRGCRDGARARTV 386

Query: 271 AERLGREIQELSFSYEGQAFSVTISQGLASLTEADSTLDSLFARADAAMYEAKRLG 326
           A RL  +      S +     V  S G++      ST D L A AD AMY AKR G
Sbjct: 387 AARL-LDAVTAPVSIDTVIHRVRASIGISLYPSLVSTGDDLIATADQAMYVAKRAG 441