Pairwise Alignments

Query, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  153 bits (386), Expect = 2e-41
 Identities = 86/186 (46%), Positives = 113/186 (60%), Gaps = 1/186 (0%)

Query: 146 GEPLIVVGMAEDITEKKQMELELHRLATTDVLTQSSNRRHFFECANLAFDTACAKGEPLA 205
           G+P +V+ +A DIT++K++E  L R ATTD LT   NRR FF  A      A   G PLA
Sbjct: 790 GKP-VVLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLA 848

Query: 206 FLLLDIDDFKDVNDSYGHLEGDQVLRRIAESGRGVLRRGDLFGRIGGEEFAAVLPGCAPE 265
            L+LD+D FK VND +GH  GD VL    ++ +  LR  D+ GR+GGEEFAAVL     +
Sbjct: 849 VLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLD 908

Query: 266 MALQVAERLGREIQELSFSYEGQAFSVTISQGLASLTEADSTLDSLFARADAAMYEAKRL 325
            AL  AERL R ++E+   + GQ    T+S GLA     D  LD +  RAD+A+Y AK  
Sbjct: 909 DALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEA 968

Query: 326 GKNRVV 331
           G+NRV+
Sbjct: 969 GRNRVM 974



 Score = 48.5 bits (114), Expect = 7e-10
 Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 36  ERLSEREQLLSSMLVSVNAVLWAMDWETRRVLYVSPAYERVFGRSAGLLLADHREWRNSI 95
           E L+  E+ L   L + +   W  ++ET   LY SP Y  + G   G     H   R+ +
Sbjct: 300 EALTRSEERLKLALDAASEAHWDWNFETGE-LYCSPRYYEMLGYVPGEFECTHDALRDLM 358

Query: 96  HPEDLDYAEHSLARVLERGAVE-----------DREYRIITADGQIRWLSDKCYINQRVE 144
           HP+DL   E + A  +   AV            + ++R+    G  +W+  +  +  R E
Sbjct: 359 HPDDL--CEVTTALCMPDPAVSHAVEACGVGQFEVQFRLRAKGGDWKWMLARGRVLARRE 416

Query: 145 PGEPLIVVGMAEDITEKKQMELELHR 170
            G P  VVG   DIT      L L R
Sbjct: 417 DGSPARVVGTHMDITAAVSQRLALGR 442