Pairwise Alignments

Query, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  135 bits (341), Expect = 3e-36
 Identities = 97/267 (36%), Positives = 141/267 (52%), Gaps = 9/267 (3%)

Query: 66  VLYVSPAYERVFGRSAGLLLADHREWRNSIHPEDLDYAEHSLARVLERGAVEDREYRIIT 125
           V+ V+PA+ER+ G  A  ++        ++    ++        +LE G+    E R   
Sbjct: 401 VVAVNPAFERITGVDAQSMVG---RLSPALGMVPVNGTRSVWDEMLEHGSWIG-ETRGPH 456

Query: 126 ADG-QI-RWLSDKCYINQRVEPGEPLIVVGMAEDITEKKQMELELHRLATTDVLTQSSNR 183
            DG QI +WLS    ++ R E G  L  VG+  DIT+ KQ E ++   A  D LT   NR
Sbjct: 457 RDGWQIPQWLS---LVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNR 513

Query: 184 RHFFECANLAFDTACAKGEPLAFLLLDIDDFKDVNDSYGHLEGDQVLRRIAESGRGVLRR 243
           +H FE  + A   A  +G+ LA + +D+D FK +NDSY H  GDQ+L  +A   R  LR 
Sbjct: 514 KHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRP 573

Query: 244 GDLFGRIGGEEFAAVLPGCAPEMALQVAERLGREIQELSFSYEGQAFSVTISQGLASLTE 303
           GD+ GR+GG+EF A + G + +  L    R   E     F Y G  FSVT S G++   +
Sbjct: 574 GDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPD 633

Query: 304 ADSTLDSLFARADAAMYEAKRLGKNRV 330
              + ++L +RAD AMY AK +GKN +
Sbjct: 634 DGDSANALLSRADIAMYRAKDMGKNAI 660