Pairwise Alignments

Query, 310 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (358), Expect = 1e-38
 Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 17/309 (5%)

Query: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           A+    + K +G+ F A+  I+L V  G  +  LGPNG GKSTTI +L+ L+  T+G + 
Sbjct: 5   AIHAENVVKQFGH-FTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIK 63

Query: 64  IFGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQ 123
           + G  + K    L+  IG + Q+F+        + +      +G+     ++R +  L  
Sbjct: 64  VLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKT 123

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
            GL ++R      +SGG K+RL +A A +H P LL LDE T+ VD E RR  W  L +L+
Sbjct: 124 YGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLS 183

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLSAP 243
            +G TI++TTHY++EAE+ C  + I++ G I  +     L+ Q+ V    +      S  
Sbjct: 184 AQGTTILVTTHYMDEAER-CHRLAIMEAGEIRADDEPEKLMQQMGVNVVEIKAPALRSLK 242

Query: 244 PQLLGYPSRLVDSHTLEVQ---------VDKAMGITALFTQLATQNIEVLSLRNKTNRLE 294
            +LL + S++  +  L ++         +D  + +   F QLA   + +         LE
Sbjct: 243 EKLLNF-SQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTL-----ARPSLE 296

Query: 295 ELFVSLVEK 303
           ++FV++  K
Sbjct: 297 DVFVTVTGK 305