Pairwise Alignments

Query, 310 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  389 bits (999), Expect = e-113
 Identities = 193/298 (64%), Positives = 239/298 (80%), Gaps = 1/298 (0%)

Query: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           AL I QL KTY  GF+AL GI L V +GDF+ALLGPNGAGKSTTIGI+S+LVNKTSG V 
Sbjct: 3   ALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVT 62

Query: 64  IFGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQ 123
           +FG+DLD      K+ +G+VPQEFNFN FE    IV+ QAGYYG+P  +AKERA++YLTQ
Sbjct: 63  VFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQ 122

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
           L LW+KR   +R+LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMW FL ++N
Sbjct: 123 LDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQIN 182

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLSAP 243
            +G+TIILTTHYLEEAE LCR+IGII  G ++ENT+M++LLG+LHVETF+LD+  N    
Sbjct: 183 AQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPIA 242

Query: 244 PQLLGYPSRLVDSHTLEVQVDKAMGITALFTQLATQNIEVLSLRNKTNRLEELFVSLV 301
           P L G   + +   +LE++++K+ GI  +FTQL  Q ++VLS+RNK NRLEELFVS+V
Sbjct: 243 P-LQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSIV 299