Pairwise Alignments

Query, 310 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 319 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  407 bits (1046), Expect = e-118
 Identities = 206/299 (68%), Positives = 241/299 (80%)

Query: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           AL I  L KTY  G +A+ GI L+VA+GDFFALLGPNGAGKSTTIGI+S+LV K+SG V 
Sbjct: 9   ALRIEGLKKTYKGGVEAVKGISLEVAKGDFFALLGPNGAGKSTTIGIISSLVQKSSGKVE 68

Query: 64  IFGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQ 123
           +FGHD+D+   A K  IG+VPQEFNFNQFE    IVV QAGYYG+P   A  RAE+YL+ 
Sbjct: 69  VFGHDIDRQLEAAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPRPEALLRAEKYLSA 128

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
           L LWDKR+ PSR LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMW+FLTELN
Sbjct: 129 LDLWDKRNSPSRQLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWSFLTELN 188

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLSAP 243
            +G+TIILTTHYLEEAE LCRNIGIID G +VE TSM+ LL +L++ETF+LDLK ++ A 
Sbjct: 189 RQGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKKLLAKLNMETFILDLKQDVDAL 248

Query: 244 PQLLGYPSRLVDSHTLEVQVDKAMGITALFTQLATQNIEVLSLRNKTNRLEELFVSLVE 302
           P L G   RL+D+HTLEV + K   +  LF QL+ Q IEVLS+RNK NRLEELFV+LVE
Sbjct: 249 PALDGIQCRLIDNHTLEVDIAKEHSLNQLFAQLSEQGIEVLSMRNKANRLEELFVALVE 307