Pairwise Alignments

Query, 310 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 312 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  392 bits (1007), Expect = e-114
 Identities = 197/300 (65%), Positives = 236/300 (78%)

Query: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           AL +  L KTY  G +A+ GI L V +GDFFALLGPNGAGKSTTIGI+S+LV KT+G+V 
Sbjct: 7   ALVLEGLKKTYKGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISSLVQKTAGSVQ 66

Query: 64  IFGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQ 123
           +F  D+DK     K  IG+VPQEFNFNQFE    IVV QAGYYG+P  +A ERAE+YL+Q
Sbjct: 67  VFDFDIDKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKHIALERAEKYLSQ 126

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
           L LWDKR+  SR+LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMW FL ++N
Sbjct: 127 LDLWDKRNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWEFLKQIN 186

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLSAP 243
           ++G+TIILTTHYLEEAE LCRNIGIID G +VE TSM+ LL +L++ETF+LDL+ ++   
Sbjct: 187 QQGVTIILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALLSKLNLETFILDLRRDIDVA 246

Query: 244 PQLLGYPSRLVDSHTLEVQVDKAMGITALFTQLATQNIEVLSLRNKTNRLEELFVSLVEK 303
           P L G   RL D HTLEV V K   +  +FTQL    +EVLS+RNK+NRLEELFV LV+K
Sbjct: 247 PTLNGMVCRLTDPHTLEVDVAKDHNLNDVFTQLTAAKVEVLSMRNKSNRLEELFVELVKK 306