Pairwise Alignments

Query, 314 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  161 bits (407), Expect = 2e-44
 Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 16/300 (5%)

Query: 15  IFVKVVETGSFSEAARQLGASPSSVSRSISRLEKALATRLLQRTTRKLRLSEGGEEVFKR 74
           +FV +VE GS   AA  L  S S V+R +S +E+    RLL R+TR+L L+  GE+V   
Sbjct: 9   VFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTSAGEQVLDY 68

Query: 75  CQEMVSAARSVMEISGQFTHEAEGLVRVSVPKAVGRFVVHPHMPEFLRRYPKVDVQLILE 134
           CQ ++  A+ V  +S   + +  GL+R+S  + +   ++   +  +L +YP+  V   + 
Sbjct: 69  CQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQASVNFHVS 128

Query: 135 DRQVDMIDDNVDLSIRITDSPPPGLVGRQLLPIEHLLCATPQYLAAHGTPGHPHDLLAHS 194
            + VD++ + +D++IRIT+   P L+ R+L   E ++CA P+YLA+H     P DL  H+
Sbjct: 129 SQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQPEDLTRHN 188

Query: 195 CIYLGETPGDSRWKFRQ------------AGKAVTVAVRGRYAANHTGVRLDAVLQHVGI 242
           C+      GD  W+F Q            AG+   + V+G  +AN + V L+A L   GI
Sbjct: 189 CLTYSYF-GDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLNATLAGEGI 247

Query: 243 ASLPYFTARHALEEGRLVQVLPAWDFIASYHGEAWLLHSPTRYLPPKLRVFIDYLVACMA 302
           A  P +  +  L  G LV +L   DF     G  + ++   +++ P LRV +D LVA  A
Sbjct: 248 AMQPVWAVKSYLNSGELVPLLR--DFKPQSLG-VYGVYQSRKHMQPTLRVMMDMLVAYFA 304