Pairwise Alignments

Query, 208 a.a., alanyl-tRNA synthetase from Pseudomonas simiae WCS417

Subject, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 40/223 (17%)

Query: 2   TERLFFTHD-HLTAELEVLSCTPHGEQFAVILQSTIFHPQGGGQPFDTGWLGESTVLRVT 60
           TE LFF H   +  E +VL      E++ V+L  T+F+ +GGGQ +D G L +  V+ V 
Sbjct: 503 TELLFFKHPTQVEFEAKVLKIV---EKY-VVLDKTLFYAEGGGQKYDIGQLNDIEVMDVQ 558

Query: 61  QEADRVVHYV---DRPLEPGPITARVDEQRRTLHTRLHSAGHLIGNAGEALGWMPIKAHH 117
           ++   V H V    +  E   +   V+   R    R H+A H+I  A   +    +  H 
Sbjct: 559 KKNGIVFHKVSDISKFKEGDTVKGAVNWDNRLKLMRNHTATHVINAAATRV----LGKHV 614

Query: 118 W-------PGEGKITFIRGEAAQAMEAEALQQQVNQWIAADYPRR---MNLEDGTREVGF 167
           W         +G++     E     + + +++  N+ + +  P     M+  D  ++ GF
Sbjct: 615 WQTGSNVDTEKGRLDITHYERISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGF 674

Query: 168 -----GELP-------------AYACGGTHVQALSELGQVSIL 192
                G +P               ACGGTH    SE G + +L
Sbjct: 675 TIYQGGVVPGDTLRIIEIEGTDVEACGGTHCSNTSECGYIKVL 717