Pairwise Alignments

Query, 135 a.a., biopolymer transporter ExbD from Pseudomonas simiae WCS417

Subject, 146 a.a., protein TolR from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 8e-12
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 16/141 (11%)

Query: 6   EPKKR--KAHIELIPMIDVMMFLLVFFVLVSLNVIPALGMKTQLP---SASSSQQL---K 57
           + KKR  KA I ++P IDVM+ LL+ F++ S  V    G+  +LP   SA S+Q L    
Sbjct: 5   QTKKREMKAEINVVPYIDVMLVLLIIFMVTSPFV--TQGVDVELPKTHSAKSAQDLAGDS 62

Query: 58  PQNKFILTLGLEGQLQLDGKD------LTVDALVPALKAAEKPDTKSTIIVNSDKGVEVS 111
             +  I+ +  EG L L   D      L+++ ++  +KA       S + V  D     +
Sbjct: 63  DSSFIIVEIDKEGNLGLSVNDEEVQRGLSIEDVIVRVKAELSLKPNSPVAVGGDAATPYA 122

Query: 112 RLVEVMDTLRLGGFTSVSIAT 132
            +V V+D L   G   V + T
Sbjct: 123 EIVLVLDELGQAGIPKVGLLT 143