Pairwise Alignments

Query, 215 a.a., biopolymer transporter ExbB from Pseudomonas simiae WCS417

Subject, 457 a.a., flagellar motor protein MotA from Vibrio cholerae E7946 ATCC 55056

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 13  VMYAAMAIAIFITIERGIYFAYVRRQARALTEVLGANVHSERDLPESLIRRDSLPLSMVL 72
           V+   + + + I + RG   A +R++ +A           +   PE   +  + PL  +L
Sbjct: 271 VILVLLGVGLIIALYRGAILATLRQKIKA-----------QLKNPE---QPGNNPLGRIL 316

Query: 73  PVLAQKASQGSRKDLDDVIETQYLTTRAPLARSLWIIETITTAAPLLGLLGTILGIIDTF 132
            V   K  Q S + L+  +    +  +  L   L +++ +   AP+LGLLGT+ G+I+TF
Sbjct: 317 AVY-NKEQQRSVEALELRLLEAVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETF 375

Query: 133 KALATAGVSDPGQISGGIGTALFATGLGIAIALFCVVFHNFFQDSLERINDQLK 186
           + +   G  DP  ++GGI  AL  T  G+  A+  ++ HN      E I + L+
Sbjct: 376 QVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAHNILSAQAEAIRNILE 429