Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Pseudomonas simiae WCS417

Subject, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

 Score = 50.1 bits (118), Expect = 3e-10
 Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 16/227 (7%)

Query: 108 VSKRALSPDIIELVMMPDRPLVVR--AGQYLKF-CLVDGD--SRCFSIANLPAGDDGRLV 162
           V +  ++ D +   + P + +  +   GQYL    +++G+   R +++++ P+   GRL 
Sbjct: 285 VEREEIARDFVTFWLEPTQEIATQYFPGQYLPIEMVIEGEPVQRYYTLSSSPSRP-GRLA 343

Query: 163 FQIRQVSGGLFSETLLSDLDAGDLLQLEGPFGACTWQETDDSPVVLFATGTGYAGIKPIL 222
             ++++ GG  S  L  +L  G  L  + P G      T   P++L + G+G   +  +L
Sbjct: 344 ISVKRIDGGRVSNWLQENLQIGTTLTAQHPTGHFHLDTTALQPLLLLSAGSGVTPMLSML 403

Query: 223 LTALARNV--EVTLYWGGAQPADFYDRAFLADASAAHPGF-----CWHPVLASQGRVQEV 275
                 N   +V  Y       D   +A L   +  H G         P    QG    +
Sbjct: 404 RYLADHNQLDDVVFYHQCRSEQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQGRL 463

Query: 276 ALSHGHA---WEQAQVYACGNAAMIRQAREQCLDAGLPAHRFVAEAF 319
           +LSH          QV+ CG    +++A+   L  G+    +  EAF
Sbjct: 464 SLSHIKRIPNLVSRQVFVCGPDGFMQKAKNLLLKQGVAESAYHQEAF 510



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 7   VELSPSGKTFEAGDE-LLLDAMLANGLSVPFSCRRGACGSCKVVVAEG 53
           V LS +G    A ++  LL+     G+ +P SCR G CG+CKV V  G
Sbjct: 523 VTLSFNGIQVSADNQKTLLEHAEDAGVRIPNSCRAGICGACKVKVKSG 570