Pairwise Alignments

Query, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 955 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  261 bits (668), Expect = 8e-74
 Identities = 157/400 (39%), Positives = 221/400 (55%), Gaps = 9/400 (2%)

Query: 233 LAEGLNQASREQQQAMAQLIQTREEAERANNAKSDFLAMMSHELRTPMNGVLGMLQLLET 292
           L  G N    E+++   +L Q R++AE AN AKS FLA MSHE+RTP+NGVLGMLQLLE 
Sbjct: 539 LVVGANTDITERKRFETELRQARDDAEAANKAKSIFLANMSHEIRTPLNGVLGMLQLLED 598

Query: 293 TEMTEEQTEYAALASESTEHLLKVINDILDFSRIERAALELEHIPFNLADLINSCAQAFQ 352
             +T +Q E   +AS+S+ +LL VINDILDF+R+   A      PF+ A  + +      
Sbjct: 599 APLTSDQQELLHVASQSSRNLLTVINDILDFTRLGSVAPSFASDPFDAAGALYTVRDTLA 658

Query: 353 HSAQQRGLALELSIPPGMDTLRVQGDPTRIRQILVNLIGNALKFTEHGNVSIEPHW--QT 410
             A+ + + +E  I P +  L + GD TR RQIL NL+GNA+KFT+ G V I  H   + 
Sbjct: 659 TGAKDKDIRIETDISPNVPPLLI-GDVTRFRQILFNLVGNAVKFTQQGTVRISLHGLERH 717

Query: 411 LDHELVWFTCTVRDSGIGISAERLELMFDAFQQADSSISRRYGGTGLGLPIARTLAERMG 470
                +     V DSGIGI  + L  +F+ F Q D S  RRY GTGLGL I R+L   MG
Sbjct: 718 SPAGALRMLLMVEDSGIGIPQDMLGNVFEPFFQVDGSYRRRYPGTGLGLGIVRSLVHGMG 777

Query: 471 GTLRAQSEEARGSVFTLEIPLAIDQHSVPAIASDADGKTGAGDGRHVLLVEDNPVNRAVV 530
           GT+   SEE  G+     +     + +   +    +     G G  VL+VED+ ++R   
Sbjct: 778 GTIAIDSEEGAGTTIACTLMFGRIEKTPEGVTEGFE----TGAGLKVLVVEDDHISRVAA 833

Query: 531 EAMLRSLGFEVSLATDGAEAIRSAESLIFTAILMDCRLPVIDGYEATRQIRQ--LPGCAD 588
             ML  LG    +A+   E I       F  +LMD ++P +DG E T  +R   +PG  D
Sbjct: 834 SRMLERLGHYPVVASSAVEGIAMLRQQTFDCVLMDIQMPEMDGLELTEALRSGLVPGVED 893

Query: 589 LPIIALTANALQGDREACLAAGMNDYLAKPFKRTDLQQIL 628
           +P++ALTA+ L  +R   ++ G++ YLAKP +   L + L
Sbjct: 894 IPVLALTAHVLTEERRDFMSRGISGYLAKPLEMDILAKAL 933