Pairwise Alignments

Query, 411 a.a., integrase from Pseudomonas simiae WCS417

Subject, 151 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (271), Expect = 8e-29
 Identities = 50/128 (39%), Positives = 81/128 (63%), Gaps = 1/128 (0%)

Query: 276 MKRRREHVVPLSRQSIEALTELRTLTGAYPLLFPGRKDRTIPRSNTVFLMALRRLGYAGR 335
           MK+RREH +PL  Q +  L  ++ ++G    +FP  +D   P ++    MAL+R+G+AGR
Sbjct: 1   MKKRREHRIPLKEQMLALLEVMKPISGHRDFIFPSDRDPKKPCNSQTANMALKRMGFAGR 60

Query: 336 QTGHGFRHIASTILNEQGFDENHIEAQLSHAKEG-IAGVYNKAVYLPQRRVMMQWYADHL 394
              HG R +AST LNEQGF+ + +EA L+H  +  +   YN+  YL +R+ MM W++ H+
Sbjct: 61  LVSHGLRSLASTTLNEQGFNPDLVEAALAHVDDNQVRSAYNRTDYLERRKPMMSWWSGHI 120

Query: 395 DELVEGNI 402
           +E  +G++
Sbjct: 121 EEAAKGSL 128