Pairwise Alignments

Query, 411 a.a., integrase from Pseudomonas simiae WCS417

Subject, 423 a.a., prophage P4 integrase from Klebsiella michiganensis M5al

 Score =  173 bits (438), Expect = 1e-47
 Identities = 118/391 (30%), Positives = 191/391 (48%), Gaps = 26/391 (6%)

Query: 27  REQDGNGLYFRVKPNGQKSWELRYKKPDGKWSWLGLGGYPEISGSLARQKAAQLREDAST 86
           R  DG+GLY  +K NG   W LRY+  +G+   + LG Y  I  +LAR+K  +++ + + 
Sbjct: 30  RLSDGSGLYLLIKSNGSAYWRLRYRF-NGEDRLISLGEYKYIPLALAREKREEVKRNIAR 88

Query: 87  GKNPLVSKQARKVADQVAANNTFEALGREWFEARRTSWESGTSRRVLGALELHVFPVFGK 146
           G +P  +K             TF  +  +W  + R  W    SRR+L +L   VFPVFG 
Sbjct: 89  GIDPRGTKDEEGFL-------TFREVAMQWHASNR-QWSKEHSRRILKSLLDEVFPVFGD 140

Query: 147 RVYTEILPLEWMEFLRGMEQKGIIEQMGRVRAFCKEIYDLARVTGRAVHNPLEGLSKFLQ 206
                +   + ++ ++ ++  G +E   R+      +  LA   G    NP+   S  L 
Sbjct: 141 DNIKLLKTQDLLKPVKQVQDSGRLELASRIYQRINSVMTLAVDNGLLEFNPIAHKSGALI 200

Query: 207 SRSAENYAHVSIEELPALLRAINSYPHAKDVRIGLRLLSLLASRPSEIREARWSEIDLTK 266
            R++E+ A + +E +P  L+ I  +   +  ++ +  L     R SE+R ARW E DL  
Sbjct: 201 KRNSEHRAALELENIPEFLKRIEKFKGRRLTQLAMTFLLHTFVRSSELRFARWKEFDLEN 260

Query: 267 KLWTIPAER------------MKRRREHVVPLSRQSIEALTELRTLTGAYPLLFPGRKDR 314
            LWTIP+ R             K +  H+VPLS Q+   + E++++TG    +F      
Sbjct: 261 SLWTIPSVREEIPGVKYSYRGSKMKTPHIVPLSHQACSIIQEIKSITGERIFVFTSDHFP 320

Query: 315 TIPRSNTVFLMALRRLGYAGRQ--TGHGFRHIASTILNEQG-FDENHIEAQLSHAKEG-- 369
             P S      AL+ +GY  ++    HGFR +A + L E G +  + IE Q+SH +    
Sbjct: 321 KKPMSENTINHALQSMGYDTKKDLCSHGFRTMACSALIESGKWSRDAIERQMSHQERNNV 380

Query: 370 IAGVYNKAVYLPQRRVMMQWYADHLDELVEG 400
            A   +KA  +P+R+ MMQW++D+L +L  G
Sbjct: 381 RAAYIHKAELIPERQKMMQWWSDYLMQLQHG 411