Pairwise Alignments

Query, 437 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 437 a.a., branched-chain amino acid transport system II carrier protein from Vibrio cholerae E7946 ATCC 55056

 Score =  344 bits (882), Expect = 4e-99
 Identities = 190/425 (44%), Positives = 265/425 (62%), Gaps = 4/425 (0%)

Query: 2   KVLKSQDVLALGFMTFALFVGAGNIIFPPIVGLQSGPHVWMAALGFLVTAVGLPVVTVIA 61
           + LK  D+LALGFM FA F+GAGNIIFPP+ G  +G ++  A  GFL+TAVGLP++T+IA
Sbjct: 3   QTLKLADILALGFMLFAFFLGAGNIIFPPLAGQLAGENITPAMFGFLLTAVGLPLITIIA 62

Query: 62  LAKVGGGMDALSSPIGKIAGGLLAAAAYLAVGPLFATPRTATVSFEVGLAPLTGESPLA- 120
           +A  GG  + L+  +   A  L+AA   + +GP FA PRT  V++E+ + P   ES  + 
Sbjct: 63  IAVAGGSWEHLTKDLPVKASVLMAALILIVIGPAFAAPRTGLVAYEMAVKPFFAESTQSY 122

Query: 121 LFLYSSVYFLVVFFVSLYPGRLLDTVGRFLAPLKIIALAILGIAAFALPAGDVGVATQEY 180
           L L+S ++F V  F S   G+L+D +G+ L P   I L IL +  F  P G++  A  EY
Sbjct: 123 LTLFSVLFFAVAMFFSWSQGKLVDLIGKLLTPALFICLIILALGVFMNPQGEMIAAQGEY 182

Query: 181 VAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPKLITRYAIIAGLIAGVGLAL 240
           ++ P ++GF+ GY TMDT  +L+FGI+IV+A+RS+G+      TRY I + +IA +GLAL
Sbjct: 183 LSQPLTKGFLEGYNTMDTFASLMFGILIVDALRSKGITDRAATTRYLITSAVIAAIGLAL 242

Query: 241 VYISLFRLGSGSHEVAAGAANGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA 300
           VY SLF LG+ S  VAAGA NG A+L  YVQ  FGS G   L+V++ LACL TAVGL  A
Sbjct: 243 VYGSLFYLGATSSSVAAGANNGGAILSQYVQALFGSYGQLVLSVIVMLACLTTAVGLISA 302

Query: 301 CAEYFSRILPLSYKTLVVILALFSLFVSNLGLTKLIAFSIPVLTAIYPPCIVLVALSFCK 360
           C+++FS+   LSYK  VVI  +    V+N+GL +LI  SIPVL A+YP  I LVAL+F +
Sbjct: 303 CSDFFSKHTSLSYKQWVVINGVACGVVANVGLAQLITLSIPVLFALYPVAIALVALTFVR 362

Query: 361 DFWLEQGRIVGPVMLVSFIFGCIDALKGAGLADWMPAQLANLPLSEQGLAWLVPSVMTLA 420
                       V+ VS +   +DA K AG   +  +  + LP  E G+ WL+P+   + 
Sbjct: 363 HKLPNPRVAYRAVLSVSLLVALLDAAKVAG---FDVSAFSFLPFFEYGMGWLLPTCAAMI 419

Query: 421 VAFAV 425
             F +
Sbjct: 420 CMFFI 424