Pairwise Alignments

Query, 590 a.a., succinate dehydrogenase from Pseudomonas simiae WCS417

Subject, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

 Score =  279 bits (713), Expect = 2e-79
 Identities = 195/556 (35%), Positives = 287/556 (51%), Gaps = 50/556 (8%)

Query: 10  DAIIIGGGGAGMRAALQLAQGGHKTAVITK--VFPTRSHTVSAQGGITCAIASADPNDDW 67
           D +IIGGGGA  RAA++    G K  VI    +F     TV A+GG    +   +  D +
Sbjct: 4   DVLIIGGGGAAARAAIEC---GQKNVVIASKGLFGKSGCTVMAEGGYNAVL---NEKDSF 57

Query: 68  RWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRPFGGQSKD 127
             H  DT+KG  YI D+  ++ + +  P     L+  G  F R+E     QRPFGGQS +
Sbjct: 58  EKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN 117

Query: 128 YGKGGQAARTCAASDRTGHALLHTLYQG-NLKAGTTFLNEYYAVDLVKNAQGE------- 179
                   RTC + DRTGH ++  L +  N       L +  A+ L+ +   E       
Sbjct: 118 --------RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKK 169

Query: 180 FVGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDI 239
             G + + +  G+   + AK+T+LATGGAG+IY  T+N     GDG  +A R GV + D+
Sbjct: 170 CFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDM 229

Query: 240 EMWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKE 299
           EM QFHPTG+ G G+LVTE  RGEGG L NK+ ERFM+ Y     +L+ RDVVA+++  E
Sbjct: 230 EMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNE 289

Query: 300 IIAGNGCGPNGDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMM 359
           I  G G       V L + HL  EV+  +L  +    K    VD    P+ V PT H+ M
Sbjct: 290 IQEGRGIDGG---VYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFM 345

Query: 360 GGVPTNIHGQAITQNAEGEDEIIHGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGL 419
           GG+  N          E  +  I GLFA GEVA   +HGANRLGGN+L +  VFG  AG 
Sbjct: 346 GGIKIN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGR 394

Query: 420 HLEKALTDGIEYDDATDANIEAALARL-NALNERTDGEDVATLRRELQSCMQNYFGVFRT 478
           +      + I+     D ++E  + +L N       G +V +L  EL++ M ++  + R 
Sbjct: 395 NALNYAEEKIDISKVYD-SVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRD 453

Query: 479 GEYMQKGIAQLADLR-KRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKE 537
              ++  + ++ ++  K++    + D S        + LEL+N++ V++    +A +RKE
Sbjct: 454 ENGLKTALEKINEIAGKKVLINGVVDFS--------KKLELENMVLVSKIVINSALLRKE 505

Query: 538 SRGAHAREDFEDRDDE 553
           SRGAH R D+   ++E
Sbjct: 506 SRGAHFRNDYPKTNEE 521