Pairwise Alignments

Query, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  165 bits (417), Expect = 1e-45
 Identities = 99/281 (35%), Positives = 153/281 (54%), Gaps = 7/281 (2%)

Query: 6   LLGAAATLVVAMSSTLASADSKTLSIGY-VDGWSDSVATTHVAAEVIKSKLGYDVKLQAV 64
           LLG A      + S  ++ D++  +I + +  W      ++V  +VI  + GY+V+L  +
Sbjct: 11  LLGLAVMFSGCVQSPQSTDDTEKGTIKFGLPPWPGVTVKSNVV-KVILEEQGYNVELNQL 69

Query: 65  ATGIMWQGVATGKLDAMLSAWLPVTHGEYWAKNKDKVVDYGPNFKDAKIGLIVPEYVKA- 123
             GI +  +A G LD  L+ WLP TH EYW +  +++     N     +GL VP Y    
Sbjct: 70  DAGITYAKLADGDLDVSLAGWLPTTHEEYWTQYGNQLEMVHVNVGKTALGLAVPTYTYEA 129

Query: 124 --KSIEDLK-TDTTFKNKIVGIDAGSGVMLKTDEAIKQYGLD-YKLQASSGAAMIAELTR 179
             +SI DL   +  F  KI+GI+ G+G+M  T++AI  Y L  Y+LQ+SS  AM+AEL R
Sbjct: 130 GIQSITDLNGNEELFDGKIIGIEPGAGIMSNTEKAIDSYSLSGYELQSSSTPAMMAELAR 189

Query: 180 AEDKQESIAVTGWVPHWMFAKWKLRFLDDPKGIYGAAETVNSIGSKGLEKKAPEVAAFLK 239
           A ++ E+I VT W PH +F K+ ++ LDDP+ +YG  + V +I     +   PEV  F +
Sbjct: 190 AINEDENIVVTVWEPHSVFFKFDIKMLDDPEKVYGDGDKVYTIARTDFKDDYPEVYEFFQ 249

Query: 240 KFQWASKDEIGEVMLAIQEGAKPDAAAKDWVAKHPERVAEW 280
           KF+     +   +     EG  P+  A++WVA +PE V  W
Sbjct: 250 KFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVANNPELVENW 290