Pairwise Alignments

Query, 662 a.a., cytochrome C biogenesis protein CcmF from Pseudomonas simiae WCS417

Subject, 663 a.a., cytochrome c assembly protein (RefSeq) from Shewanella loihica PV-4

 Score =  473 bits (1216), Expect = e-137
 Identities = 279/654 (42%), Positives = 382/654 (58%), Gaps = 39/654 (5%)

Query: 9   ELGQLAMILALCFAIVQAVVPLLGAWRGDRLWMSLAQPA-----AWGQFAFLLFAFGCLT 63
           E+G L +I++L   ++ A+ P++ A  G +L +   QP      +  Q A L      L 
Sbjct: 16  EIGLLLLIISLTLCLLTAMSPVMPAC-GVKLRLKPYQPLFIRLNSLAQVASLFI----LA 70

Query: 64  YAFMTDDFSVAYVANNSNTALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLP 123
           Y F+++DFSVAYVANNSNT L   YK +AVWG HEGS+L W   +G W+  +S+      
Sbjct: 71  YLFLSNDFSVAYVANNSNTQLASLYKLAAVWGGHEGSMLFWIGAMGIWSCVLSLQPNHKD 130

Query: 124 QVMLARVLAVMGMISIGFLLFLIMTSNPFSRILPQIPADGHDLNPLLQDIGLIVHPPMLY 183
           +     + AV+G I  G + FL++ SNPF+R+LP IP +G DLNP+LQDIGLI+HPP+L+
Sbjct: 131 R-FFHYLHAVLGAIQAGLIAFLLIGSNPFARLLPGIPVEGRDLNPILQDIGLILHPPLLF 189

Query: 184 MGYVGFSVAFAFAIAALLGGRLDAAW-ARWSRPWTIVAWAFLGIGITLGSWWAYYELGWG 242
           +GYVG +V FA AIAALL          R  RPW I+AWA L  G   GSWWAY ELGWG
Sbjct: 190 IGYVGLAVCFAAAIAALLDNSQPLKQHCRLMRPWAILAWAMLTGGNAFGSWWAYNELGWG 249

Query: 243 GWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSG 302
           GWWFWDPVENASF+PWLV TAL+HSL + E+R  F   ++ LAI  FSL LLGTFLVRSG
Sbjct: 250 GWWFWDPVENASFIPWLVATALMHSLILGERRDRFHGTSLFLAILGFSLCLLGTFLVRSG 309

Query: 303 VLTSVHAFASDPERGVFILIFLLFVVGGSLTLFALRAPVVKSRVGFNLWSRETLLLGNNL 362
           V+ SVHAFA+DP RG  +L     V     TL   R P +   V  N+ SRE+L+   NL
Sbjct: 310 VVQSVHAFAADPLRGGAMLTLFALVSICGFTLLLQRLPSLYRPVNSNMLSRESLMQLGNL 369

Query: 363 VLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALFIPLMGLLMVVMAVGVLVRWKDT 422
           +L+VAA  ILLG+ YPL+ +  SG  +SVG PYFN+LFIPL  L+ +VM    L+RW+ +
Sbjct: 370 LLLVAAISILLGSCYPLLYEVASGQSISVGAPYFNSLFIPLTWLICLVMGAAPLMRWQVS 429

Query: 423 PVKWLVGMLMPVLLGSVALAVIAWVAYGDFNWAVL----ATFLLA--AWVLLAGVRDIFD 476
                 GML  +     ALA I        N  +L    A FLL   A + L G   ++ 
Sbjct: 430 N----PGMLRQL----TALAAICLFIGLTLNTLLLKEFAAHFLLGSFACLWLLGCTGLY- 480

Query: 477 KTRHKGLIKGLPTLT-----RSYWGMQIAHIGIAVCALGVVLSSQNSAERDLRLAPGESM 531
                 L K L   T     R  + M  AH+G+A+  LG   SS    E  LR+ PG+  
Sbjct: 481 ------LHKRLAAYTGAGDNRRCYAMSFAHLGVALSILGATCSSYFQQEELLRMGPGQGK 534

Query: 532 DLAGYHFIFEGAKHFEGPNFTSDKGTVRV-VRNGKEIAVLHPEKRLYTVQSSMMTEAGID 590
           ++AGY FI+   +     ++++ +  + V  R  + +A L+P+++ +   +  ++ AGI 
Sbjct: 535 EVAGYTFIYRATETVSHTSYSALQAKIEVRDRREQHLAYLYPQRQTFNSNAMQISAAGIH 594

Query: 591 AGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALDRRYR 644
                DLY+++G  L +  + +R+  KP + WIW GGL+  F GL   L R+ R
Sbjct: 595 RSLFADLYISMGNRLSEEEFLIRISYKPLIGWIWIGGLIMMFAGLSLLLPRKVR 648