Pairwise Alignments

Query, 296 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 19/200 (9%)

Query: 89  ILYADEHLVVADKPHFLPVTPAGEYVEQ--TLLRRLIRRLDNPSLVPLHRIDRHTAGLVL 146
           ++Y DEH++ A+KP  L   P G  VE   ++  RL+     P +  +HR+D  T+GL+L
Sbjct: 16  VIYEDEHIIAANKPSGLLSVP-GRPVEHYDSMWARLVDYC--PDVKVVHRLDMSTSGLIL 72

Query: 147 FSANPASRSAYQQLFPTRQIDKFYEAIAPALPDLTFPRVHKSRLVD--GEPFFRM--QEG 202
           F+      SA ++ F  R   K Y A    + +     V+     D    P  ++  +EG
Sbjct: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEG 132

Query: 203 QGVANTETAVEVREKKGDLWRYGLFPVTGKKHQLRVHMTALGASICNDPFY--PEVIKDA 260
           +  + T   V  RE+K  + R  L P+TG+ HQLRVHM +LG  I  D  Y  PE +   
Sbjct: 133 RD-SLTRYQVVKREEKTTVVR--LIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAV--- 186

Query: 261 VDDYANPLKLLAQGVRFIDP 280
             ++A+ L+L A  + F  P
Sbjct: 187 --EFADRLQLHAAELCFYHP 204