Pairwise Alignments

Query, 436 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 404 a.a., sun protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (355), Expect = 4e-38
 Identities = 107/308 (34%), Positives = 146/308 (47%), Gaps = 17/308 (5%)

Query: 127 ALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYL 186
           A + + + +PV+    P WL    +      WE   AA N  P   LRVN    SRD  +
Sbjct: 109 ARIEQAKTNPVLWDGCPEWLDTMGREQLGASWEKERAALNRPPKRFLRVNGLKVSRDELV 168

Query: 187 QLLTDAGIGATPCVYSVDGIVLEAATD--VRSLPGFAEGWISVQDEAAQLAADLLDLAPG 244
           Q L    + +T  V SVD   LE  +D  +     F EG    QD  +Q  A  LD  PG
Sbjct: 169 QKLATEFV-STQVVDSVDS-ALEVTSDSALFRTNSFKEGLFEQQDAGSQRVAAALDAKPG 226

Query: 245 QRVLDACCAPGGKTCHILEVEKDLVGVVAVDLEAKRLVRVRENLARLGL-SAELIAADGR 303
            RV+DAC   GGKT HI    +    ++A+D+E  +L  ++E   R G  + E     G 
Sbjct: 227 MRVIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGS 286

Query: 304 DTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWPTLE 363
            T          R+LLD PCS  GV++R+PD K     D +  L  LQ  +L +    ++
Sbjct: 287 KTIKRLK-LTADRVLLDVPCSGLGVLKRNPDAKWRDTADRLPVLMELQKHILSSYSRMVK 345

Query: 364 VGGILLYATCSTLPTENTEVIEAFLARTSGARELDLATTAGIRQPHGRQLLAQEGGHDGF 423
           VGGI++YATCS  P EN   ++AFLA     R L+  T           +   + G DGF
Sbjct: 346 VGGIVVYATCSIFPCENRGQVDAFLAENPNFRLLEDET-----------ISPADTGFDGF 394

Query: 424 YYAKLIKI 431
           Y AKL +I
Sbjct: 395 YLAKLERI 402