Pairwise Alignments

Query, 402 a.a., ammonium transporter from Pseudomonas simiae WCS417

Subject, 470 a.a., ammonium transporter from Synechococcus elongatus PCC 7942

 Score =  124 bits (311), Expect = 6e-33
 Identities = 117/444 (26%), Positives = 187/444 (42%), Gaps = 53/444 (11%)

Query: 1   MENLHSAVDTLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAI 60
           +E L+S V      ++TL +LIG+ +VL M  G AF   G  R +N +N +        +
Sbjct: 37  LEQLNSNVTAAKTGTDTLLLLIGSALVLLMTPGLAFFYGGFGRAQNVLNIMMMSFLMMGL 96

Query: 61  STLAYFFIGYWISYGVSFMQPAA-------------------VISADH----GYGLVKF- 96
             + +   GY +++  S   P                     V + D     G     F 
Sbjct: 97  VGMTWVIYGYSLAFDTSLGSPFIGGFSNLFFNGVGGKFGIDPVWAGDELMISGMSASSFA 156

Query: 97  FFLLTFAAAIPAIISGGIAERARFAPQLCATALIVAFIYPFFEGLVWNGNFGLQAWLLAT 156
            F   FA   PA+ISG + ER  F        L    +Y     +VW  N     ++   
Sbjct: 157 LFQGMFAIITPALISGALVERVNFKAWFWFGLLWSTLVYIPMAHMVWGSN----GFIYGQ 212

Query: 157 FGASFHDFAGSVVVHAMGGWLALAAVLLLGPRNGRYREGRLVAFAPSSIPFLALGSWILI 216
            GA   DFAG  VVH   G  AL +V ++GPR  R    RL    P ++PF+ LG+ +L 
Sbjct: 213 IGAL--DFAGGTVVHIASGVGALVSVAMIGPR--RVFPNRLSP--PHNVPFILLGAGLLW 266

Query: 217 VGWFGFNVMSAQTLNSVSGLVAVNSLMAMVGGTVAALIIGRNDPGF-----LHNGPLAGL 271
            GWFGFN  S       +G   + +  A     +  L++ + D G         G +AGL
Sbjct: 267 FGWFGFNGASYFAAQG-AGFAFLTTNTAAATAMLTWLLLEQIDLGKPTAVGAATGAVAGL 325

Query: 272 VAICAGSDLMHPVGALVTGAVAGGLFVWFFIAAQDRWKIDDVLGVWPLHGLCGVWGGIAC 331
           V I   +  +    AL  GA+   +   F    + R ++DD L  + +HG+ G  G I  
Sbjct: 326 VGITPSAGFIPVWAALPIGALTALVCFLFVAKVKSRIRLDDSLDAFGVHGVGGTVGAILT 385

Query: 332 GIFGQT------------ALGGLGGVSLI-SQLIGTALGVLVALVGGLLVYGVIKRVHGL 378
           GIF Q              +   G +++  +Q+    +  L   +   +++ ++K V  +
Sbjct: 386 GIFAQKDFLVEKAFPTQFKVISQGPLAMTWAQIQAVLITYLFVGIATFVIWTILKSVMRV 445

Query: 379 RLSQEEEYYGADLSIHKIGAVSQD 402
           R ++E+E  G D ++H   A S++
Sbjct: 446 RATEEQELEGLDFALHGEDAYSKE 469