Pairwise Alignments

Query, 402 a.a., ammonium transporter from Pseudomonas simiae WCS417

Subject, 416 a.a., Rh-like protein/ammonium transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  189 bits (480), Expect = 1e-52
 Identities = 146/412 (35%), Positives = 201/412 (48%), Gaps = 36/412 (8%)

Query: 1   MENLHSAVDTLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAI 60
           +  L   V  L  + +T + LI   +V+ M AGFA LE G VR KN    L+K +  ++I
Sbjct: 4   ISKLGLTVAELRFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVCLYSI 63

Query: 61  STLAYFFIGYWISYG--------VSFMQPAAVISADHGYGLVK-FFFLLTFAAAIPAIIS 111
           + + Y  +GY I Y          SF       +AD  + L   FFF + F A   +I+S
Sbjct: 64  ACITYLIVGYNIMYVDNPEAGWLPSFGTLIGTQAADADHSLESDFFFQVVFVATSMSIVS 123

Query: 112 GGIAERARFAPQLCATALIVAFIYPFFEGLVWNGNFGLQAWLLATFGASFHDFAGSVVVH 171
           G +AER +    L  + ++ A IYP      W G F           A F DFAGS +VH
Sbjct: 124 GAVAERMKLWAFLAFSVVMTAVIYPVEGFWTWGGGF--------VSAAGFVDFAGSGIVH 175

Query: 172 AMGGWLALAAVLLLGPRNGRY-REGRLVAFAPSSIPFLALGSWILIVGWFGFN----VMS 226
             G   AL+ V+LLG R G+Y   G++     S++P   LG +IL +GWFGFN    +M 
Sbjct: 176 MAGAAAALSGVILLGARKGKYGPSGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMV 235

Query: 227 AQTLNSVS-GLVAVNSLMAMVGGTVAALII-----GRNDPGFLHNGPLAGLVAICAGSDL 280
           +   N+ S G + VN+  A   G ++AL++     G+ D   + NG LAGLVAI A    
Sbjct: 236 SDAANAASVGKIFVNTNSAAAFGAISALVVCKMIWGKADLTMILNGALAGLVAITADPLS 295

Query: 281 MHPVGALVTGAVAGGLFVWFFIAAQDRWKIDDVLGVWPLHGLCGVWGGIACGIFGQTALG 340
                A   G +AG L V F I   DR KIDD +G   +HG+ GV G +   +    A  
Sbjct: 296 PSLEFAAAIGLLAGALVV-FSIVGFDRIKIDDPVGAISVHGVAGVLGLLL--VPASNADA 352

Query: 341 GLGGVSLISQLIGTALGVLVALVGGLLVYGVIKRVHGLRLSQEEEYYGADLS 392
            LGG     QL G             LV+ V+K   G+R+S+EEEY G D S
Sbjct: 353 TLGG-----QLFGICAIFAWTFGASFLVWFVLKVTMGIRVSEEEEYNGMDAS 399