Pairwise Alignments

Query, 402 a.a., ammonium transporter from Pseudomonas simiae WCS417

Subject, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

 Score =  273 bits (699), Expect = 5e-78
 Identities = 155/410 (37%), Positives = 235/410 (57%), Gaps = 21/410 (5%)

Query: 3   NLHSAVDTLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAIST 62
           N+  A++TL +SS+ +F++     +  MH GFA LE G VR+KN  NA+ K + D+ I  
Sbjct: 12  NIMDALNTLANSSDVMFLIFTGAFIFIMHLGFAMLEGGQVREKNVNNAMMKNMGDWIIGC 71

Query: 63  LAYFFIGYWISYGVS----FMQPAAVISA-----DHGYGLVKFFFLLTFAAAIPAIISGG 113
           +++  +G  I+  ++    F+    + SA     ++G  L  +F  L FAA    I++GG
Sbjct: 72  ISWLLVGSVIARTLNPADFFIWWGKIASATPFLTNNGLELANWFLGLVFAATAATIVAGG 131

Query: 114 IAERARFAPQLCATALIVAFIYPFFEGLVWNGNFGLQAWLLATFGASFHDFAGSVVVHAM 173
           IAER +F   +  + +I A +YPFF  L   G +G            FHD+AGS++VH +
Sbjct: 132 IAERIKFKSYILISIVITALLYPFFSYL---GPWGAGV-------IPFHDYAGSLMVHGV 181

Query: 174 GGWLALAAVLLLGPRNGRYREGRLVAFAPSSIPFLALGSWILIVGWFGFNVMSAQTLNSV 233
           GG+LAL  +  +GPR GR+   + +     +IP   LG++IL  GW+GFNV S+  L+ +
Sbjct: 182 GGFLALGLIAAIGPRFGRFVNKKAITIPGHNIPMSILGAYILAFGWYGFNVGSSLALSDI 241

Query: 234 SGLVAVNSLMAMVGGTVAALIIGRNDPGFLHNGPLAGLVAICAGSDLMHPVGALVTGAVA 293
           SGLV   + +AM GG +   +  +ND  +  NG LAG VAICAG+D++ P+GAL+ G +A
Sbjct: 242 SGLVCATTTLAMAGGGLGGCLFSKNDVLYTANGLLAGTVAICAGTDIVSPLGALIIGFIA 301

Query: 294 GGLFVWFFIAAQDRWKIDDVLGVWPLHGLCGVWGGIACGIFGQTALGGLGGVSLISQLIG 353
           G      F    ++  +DDV GV P+H   G  G I  GIFG TA GG+GGVSL  Q+I 
Sbjct: 302 GSQVPLIF-KIVEKMGLDDVCGVIPVHATSGALGAILAGIFGMTAFGGVGGVSLTEQIIA 360

Query: 354 TALGVLVALVGGLLVYGVIKRV-HGLRLSQEEEYYGADLSIHKIGAVSQD 402
           T +  +     G ++  ++  V  GLR+ + EE  G D+SIHK+ A  ++
Sbjct: 361 TLICAVYGTGAGFILGKLVGAVTGGLRVKESEEKAGLDISIHKLPAYPKE 410