Pairwise Alignments

Query, 402 a.a., ammonium transporter from Pseudomonas simiae WCS417

Subject, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

 Score =  278 bits (711), Expect = 2e-79
 Identities = 163/410 (39%), Positives = 243/410 (59%), Gaps = 31/410 (7%)

Query: 3   NLHSAVDTLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAIST 62
           N+ + + TL  S + +F+++  V+V +M  GFA LE G VR+KN  N + K ++D+ I  
Sbjct: 12  NIVTGLSTLATSGDVMFLVLMGVLVFSMQLGFALLEGGQVRKKNVNNVMMKNMADWLIGA 71

Query: 63  LAYFFIGYWISYGVSFMQPAAVIS----------ADHGYGLVKFFFLLTFAAAIPAIISG 112
           +++ FIG  +S     + PA   S          A++G  L  +FF L FAA    I+SG
Sbjct: 72  VSWLFIGGVLSVS---LVPADFFSWWGQIFTTNFANNGIDLANWFFGLVFAATAATIVSG 128

Query: 113 GIAERARFAPQLCATALIVAFIYPFFEGLVWNGNFGLQAWLLATFGASFHDFAGSVVVHA 172
           G+AER +F   L  + +I A +YP F   V+ G +G            F+D+AGS VVH 
Sbjct: 129 GVAERIKFKSYLLMSIIITAILYPLF---VYLGPWGSGM-------IPFNDYAGSFVVHG 178

Query: 173 MGGWLALAAVLLLGPRNGRYREGRLVAFAPSSIPFLALGSWILIVGWFGFNVMSAQTLNS 232
           +GG+LAL A+  LGPR G++   + ++    +IP    G+++L +GW+GFNV S+  +  
Sbjct: 179 LGGFLALGAIAALGPRIGKFVNKKAISIPGHNIPMSVFGAFVLAIGWYGFNVGSSFAVAD 238

Query: 233 VSGLVAVNSLMAMVGGTVAALIIGRNDPGFLHNGPLAGLVAICAGSDLMHPVGALVTGAV 292
           +SGLV   + +AM GG + AL+  ++D  F  NG +AGLVAIC+G+D++ P+GAL+ G V
Sbjct: 239 ISGLVCATTTLAMAGGGIGALLASKDDVLFTANGIVAGLVAICSGTDVVSPIGALIIGLV 298

Query: 293 AGGLFVWFFIAAQDRWKIDDVLGVWPLHGLCGVWGGIACGIFGQTALGGLGGVSLISQLI 352
           A G+ V       ++  +DDV GV P+HG  G+ GGI  G+FG  ALGG GGVSL++QLI
Sbjct: 299 A-GIQVPIVYKIVEKMGLDDVCGVIPVHGTAGILGGILTGVFGMAALGGAGGVSLVNQLI 357

Query: 353 GTALGVLVALVGGLLVYGVIKRV----HGLRLSQEEEYYGADLSIHKIGA 398
              L V   + G  L +G+ K V     GLR+++EEE  G DL+ HK+ A
Sbjct: 358 AAGLTV---VYGTGLGFGLGKLVGGFTGGLRVTEEEEKMGLDLAEHKLPA 404