Pairwise Alignments

Query, 1215 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  254 bits (648), Expect = 3e-71
 Identities = 181/525 (34%), Positives = 270/525 (51%), Gaps = 24/525 (4%)

Query: 568  RQIQHRRMAERALNDQFEFMRALVNETPHPIYVRDRNGLLQTCNDSYLQVF--DVKREDV 625
            + I  R+  E  L      + AL+      I V D N  +   N +  Q+F  DV  +++
Sbjct: 375  QDITERKRDEDFLMATTSRLSALIESMQAGILVEDENRQIVLANQALGQLFELDVDPQEL 434

Query: 626  IG---KSALQISTALETEASQYHADYQRVVAQGNPLIVDRPLHIRGKKLT---IYHWILP 679
            +G   +  LQ    L  + +++    + VV     ++ +      G+ L    I  ++ P
Sbjct: 435  VGVDCRLVLQHLQGLCADGARFVPRVEAVVEDRRAVLGEEIRLADGRVLERDYIPIYLFP 494

Query: 680  YRDSTGEVQGIIGGWIDISERRQLFDELRAAKERADEANRAKSTFLATMSHEIRTPMNAV 739
                  + +G +  + DI+ER+    EL+ AKE A+ ANRAK  FLA MSHEIRTPMN +
Sbjct: 495  QVAQPEDYRGHLWLFRDITERKHAELELQQAKEAAESANRAKGEFLANMSHEIRTPMNGI 554

Query: 740  IGMLELTLKRADQGHLDRPAIEVAYHSAKDLLELIGDILDIARIESGRLSLSPERVNLKD 799
            +GM +L L  A      R  +E+   SA  LL +I DILD ++IE+G+L L     +L+ 
Sbjct: 555  LGMTDLALDSALTPE-QRDYLEMVKSSADALLVIINDILDFSKIEAGKLELEHIHFHLRQ 613

Query: 800  VIESVVRVFDGLARQKTLSLLLEFKPGLDDTDVLIDPLRFKQVLSNLVSNAIKFTERGEV 859
            ++   ++  +  ARQ++L+L  E    + D   L DP R +QVL NLV NAIKFTE G+V
Sbjct: 614  LLRETLKPLELRARQRSLTLRCEVPEEVAD-GYLGDPGRLRQVLINLVGNAIKFTEEGQV 672

Query: 860  KVKVEVHATDLPQQVEMKLVVEDTGIGISREDQLRLFEPFSQADNSGHLARSGAGLGLVI 919
             V+VE       +   +   V DTGIGI  + Q  +FE FSQAD+S      G GLGL I
Sbjct: 673  AVRVEA------RDGLLHFAVSDTGIGIPADKQQLIFEAFSQADSSVTRRFGGTGLGLTI 726

Query: 920  CRSLCAMMGGQLSLSSVPMVGTQVYVSLKMHSLQ-PVHAVEEPKPATPTPAPVLNVLVVD 978
            C  L  +MGG + + S P  G+  + + ++ ++  P  + E          P L +LV +
Sbjct: 727  CTRLVRLMGGHMWVESDPGQGSTFHFTARLEAVAGPAESGEADAGRGEVVLPPLRLLVAE 786

Query: 979  DHPANRLLMCQQLGYLGHQFTAAQHGAAGFQAWRQEHFDLVIADCNMPIMNGYELSRSIR 1038
            D+P N+ L+   L   GH+ T A +G     A   +HFDLV+ D  MP+M G E +R IR
Sbjct: 787  DNPVNQKLVLTLLQKRGHRVTLADNGQQALAALATDHFDLVLMDMQMPVMGGLEATRRIR 846

Query: 1039 EYE----QREQLPPCVILGFTANAQPEEKRRCAEAGMNDCLFKPI 1079
              E      + LP   I+  TANA   ++  C EAGM+  + KP+
Sbjct: 847  AAEAARGDGQHLP---IVAMTANAMAGDRELCLEAGMDGYVSKPL 888