Pairwise Alignments

Query, 769 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  288 bits (738), Expect = 1e-81
 Identities = 199/559 (35%), Positives = 299/559 (53%), Gaps = 62/559 (11%)

Query: 239  DRLTEYLGQLEDIVSARTLELKASNQRLSQSNDELEAAKMHALGMAQARAAFLANMSHEI 298
            D++   +G L D+   + +E            DEL  AK  A  M+QA+  FLANMSHEI
Sbjct: 571  DKVNGIVGILLDMTERKEME------------DELRKAKEAADAMSQAKGDFLANMSHEI 618

Query: 299  RTPLNGLLGMIALSLDSPLNAEQRQQLSIAHDSGKVLVELLNDILDLSKFDAGQLELERI 358
            RTP+N +LGM  L+L++PL+  QR+ ++  ++S K L+ ++NDILD SK +AG+L +ERI
Sbjct: 619  RTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERI 678

Query: 359  PFDLGSLVEDTANLLSQNA-APSVELTCLIDPQFPAQVLGDPTRVRQIVSNLLSNALKFT 417
             F+L  ++++   ++S  A    +E    IDP  P  ++GDP R+ Q++ NL  NA+KFT
Sbjct: 679  DFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFT 738

Query: 418  RFGRVDV-----RLSAHEGQVRIEVCDTGIGIAQEAQVKIFQPFTQAGAGITRQFGGTGL 472
              G + +     +L+  +  +R  V DTGIGIAQ+    +F  F+QA   ITRQ+GGTGL
Sbjct: 739  SQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGL 798

Query: 473  GLALTHNLCEAMKGRLSISSEVGFGSQF------------CADLPLPTHLPAIQPAPLKG 520
            GL+++  L E M G++++ SE G GS F              D+  P H  A +      
Sbjct: 799  GLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADK------ 852

Query: 521  EVIAITSTGSG---LTELLTTLLPHWGLTPRCYPRDEDLSGQTPDLLITDCP-------E 570
             V+ +    S    L  LLT +  +       +    ++  +  D+L  D         E
Sbjct: 853  RVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIE 912

Query: 571  CLFRLRPTIT---APILVVTAYGNFMPSEEVAALAPLQQQARPLSRNALYQILQRNLRSD 627
             L R++           +VTAYG  +  +   +        +P++ + L   +  +    
Sbjct: 913  LLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNLLDAIVTSYG-- 970

Query: 628  AQLILDPIQMETAPLVHRAR-------ILLVEDNPVNQLVAKGMLSKLGCEVIVAAHGGE 680
                ++ ++ +T    H +R       +LLVEDN VNQ VA G+L   G  V+VA HG E
Sbjct: 971  ----IEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQE 1026

Query: 681  ALKFLEEQHFDLVLMDCNMPVMDGYEASRQIRRSGRWPDLPIVALTANALSEERERCRAA 740
            AL+ LE   FDLVLMD  MPVMDG  A+  IR + RW  LPIVA+TANA++ + ERC  A
Sbjct: 1027 ALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQA 1086

Query: 741  GMNDYLAKPFRREELSGLL 759
            GMND+L+KP   ++   +L
Sbjct: 1087 GMNDHLSKPIEVDKFYQVL 1105