Pairwise Alignments

Query, 769 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  263 bits (673), Expect = 3e-74
 Identities = 197/521 (37%), Positives = 271/521 (52%), Gaps = 41/521 (7%)

Query: 272 ELEAAKMHALGMAQARAAFLANMSHEIRTPLNGLLGMIALSLDSPLNAEQRQQLSIAHDS 331
           E+  AK  A    +A++ FLANMSHEIRTP+NG++GM  L+LD+ L  EQR  L     S
Sbjct: 398 EILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMS 457

Query: 332 GKVLVELLNDILDLSKFDAGQLELERIPFDLGSLVEDTANLLSQNA-APSVELTCLIDPQ 390
              L+ +++DILD SK +AG+L++E IPFDL  +  D    ++  A    +EL     P 
Sbjct: 458 ANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPG 517

Query: 391 FPAQVLGDPTRVRQIVSNLLSNALKFTRFGRVDVRLSAHE----GQV-RIEVCDTGIGIA 445
            P ++LGDP R+RQI+ NLL NA+KFT  G ++V +   E    GQV    V DTGIGIA
Sbjct: 518 VPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIA 577

Query: 446 QEAQVKIFQPFTQAGAGITRQFGGTGLGLALTHNLCEAMKGRLSISSEVGFGSQFCADLP 505
            E Q  IF+ F Q  +  TR+FGGTGLGL +   LCE M GR+ + S  G GS F   L 
Sbjct: 578 PEKQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQ 637

Query: 506 LPTHLPAIQPAP---LKGEVIAITSTGSGLTEL-LTTLLPHWGLTPRCYPRDED-----L 556
           LPT   A  P P   L G+   +    +      L  LL  WG T        +      
Sbjct: 638 LPTD-GAAAPEPERRLSGKPALLLVVANARQRCRLQGLLASWGATVVAAASGAEGLALLE 696

Query: 557 SGQTPDLLIT------DCPECLFRL-RPTITAPILVVTAYGNFMPSEEVAALAPLQQQAR 609
            GQ   ++        D  + L  L R     P+L++ +       +E+A    L     
Sbjct: 697 QGQWDGVVADSRPVDGDAGDLLEHLARSPGRVPLLMLLSPSRM--RQEIARCKAL-GVGH 753

Query: 610 PLSRNALYQILQRNLRSDAQLILDPIQMETAPLVHRA--------RILLVEDNPVNQLVA 661
            L + AL   L R+L    Q +L+P        V  A         +LL ED+PVNQ + 
Sbjct: 754 YLGKPALADELWRSL----QALLEPAVAGVPATVAEAAGTPPAGLEVLLAEDHPVNQQLM 809

Query: 662 KGMLSKLGCEVIVAAHGGEALKFLEEQHFDLVLMDCNMPVMDGYEASRQIR---RSGRWP 718
           + ML ++G  V +A HGGEA+     + FDLVLMD  MP M G +A+R IR   ++    
Sbjct: 810 RNMLERMGHRVTLARHGGEAVAAAARRRFDLVLMDMQMPEMGGEQATRLIRADEQARGLA 869

Query: 719 DLPIVALTANALSEERERCRAAGMNDYLAKPFRREELSGLL 759
            L I AL+A A  E+R+R   AGM+ YL KP ++++L  +L
Sbjct: 870 PLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQEVL 910