Pairwise Alignments

Query, 473 a.a., glycosylase from Pseudomonas simiae WCS417

Subject, 486 a.a., murein transglycosylase from Pseudomonas fluorescens FW300-N2E3

 Score =  115 bits (287), Expect = 4e-30
 Identities = 122/477 (25%), Positives = 202/477 (42%), Gaps = 54/477 (11%)

Query: 1   MIRPSALLMLCLTLLLPVAAVARLDGPLEVTKPGKVRDLAEIRSSRTLRVLVNQSRNSSG 60
           M  P+AL       L+       L G ++     K   L  ++    LRV+   S  +  
Sbjct: 1   MFSPTALRPRFAKWLIATGLFLMLSGCVD-----KPNTLERVKEDGVLRVVTRNSPATYF 55

Query: 61  EVQGQAIGVEYHRLRAFEQYLNGHARDGQEINLKIIPKAKDQLLGALARGEGDLVAPGEL 120
           + +    G EY  ++ F   L    +     NL       D L G L +  G ++A   L
Sbjct: 56  QDRNGETGFEYELVKRFADDLGVKLKIETADNL-------DDLYGQLGKPGGPVLAAAGL 108

Query: 121 LDV-KAAHKISASDPIVSDVPLWLVGVKGERRFTKLEQLSGRTLALTTGSAAADAISQVN 179
           +   K   ++  S   +   P  ++   G+ R T    L G+T+ +  GS  AD ++ + 
Sbjct: 109 VGSDKRKQQVRFSHSYLEVTPQ-IIYRNGQSRPTSAADLVGKTIMVLKGSTHADQLAALK 167

Query: 180 QKLALHKQPPVKVEWVDPTLAVEDVLEMVQAGIFHLTIVEKPIAERWSKILPKLR--FDK 237
           +K      P ++ E  D  + V D+L MV  G   LT+V+              R  FD 
Sbjct: 168 KKY-----PGIEYEESD-AVEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFTNARVAFD- 220

Query: 238 QVAISEPGDEYWFVRQ-DASMLRASIDRFLKTYRTPADQDVAFQRIYRRLYQVRNPLARV 296
              + +  ++ W V   D + L   I+ FL      A ++   QR+  R Y   + L  +
Sbjct: 221 ---LGDASNQSWAVAAGDDNSLLNEINDFLDK----AQKNGTLQRLKDRYYGHVDVLGYM 273

Query: 297 D--------RQRLEKLRPVLQKHAREQGMDWLNLAALAFKESALDPGARNSGGPTGLMQI 348
                    +QRL K     +  A+E+ +DW  LAA+ ++ES   P   +  G  GLM +
Sbjct: 274 GAYTFAEHLQQRLPKYEKHFKASAKEEKVDWRLLAAIGYQESLWQPAVTSKTGVRGLMML 333

Query: 349 TPSAAQRVGVNNIESLDSNVQAGARYLAMIRRKFFASPKLNERERMAFVLAAYNMGPERV 408
           T + AQ +GV+N      ++  GA+YLA  + +      + E +R  F LAAYN+G   +
Sbjct: 334 TQNTAQAMGVSNRLDAKQSIMGGAKYLAYTKDQL--DDSIQEPDRTWFALAAYNVGSGHL 391

Query: 409 QGMRTEAKRRGLNPNQWFFQ---VERIAMEQ--------VGMGG--VSYVNSVNKYY 452
              R  A + GLNP++W      + R++ +Q           GG  V +V ++ +YY
Sbjct: 392 DDARKLAAKEGLNPDKWLDVKKILPRLSQKQWYSKTRYGYARGGEPVHFVANIRRYY 448