Pairwise Alignments

Query, 473 a.a., glycosylase from Pseudomonas simiae WCS417

Subject, 476 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 102/409 (24%), Positives = 178/409 (43%), Gaps = 42/409 (10%)

Query: 64  GQAI-GVEYHRLRAFEQYLNGHARDGQEINLKIIPKAKDQLLGALARGEGDLVAPGELLD 122
           GQ + G +Y     F ++       G  +N++  P   D L  A+  GE DL+A G L D
Sbjct: 51  GQGLAGFDYEMAERFAKH------QGLTLNMQPYPTISD-LYQAMRNGEIDLIAAG-LAD 102

Query: 123 VKAAHKISASDPIVSDVPLWLVGVKGERRFTKLEQLSGRTLALTTGSAAADAISQVNQKL 182
            ++  +     P +  V   LV  +G +  T + QL      ++  S     I  + +  
Sbjct: 103 TQSRREQFRLGPPLYYVNQVLVYKQGAKYPTDVSQLDDNITVISDSSF----IETLAEMQ 158

Query: 183 ALHKQPPVKVEWVDPTLAVEDVLEMVQAGIFHLTIVEKPIAERWSKILPKLRFDKQVAIS 242
            L+ +     +W   +   E++L M+       TI +    E   + +P+LR      + 
Sbjct: 159 KLYPELVWDQQWDKDS---EELLAMIARDEISYTIADSTTFEINRRYMPELRAGP--VLR 213

Query: 243 EPGDEYWFVRQDAS-MLRASIDRFLKTYRTPAD----QDVAFQRIYRRLYQVRNPLARVD 297
           E     W +  + S  L + +  F    +         +  F  + R  Y       R  
Sbjct: 214 EGQAVVWLLPPNGSDQLMSDLLSFWHQEKRAGTLAHLNEKYFAHVKRFDYVDTRAFLRAI 273

Query: 298 RQRLEKLRPVLQKHAREQGMDWLNLAALAFKESALDPGARNSGGPTGLMQITPSAAQRVG 357
             RL K R    ++A +  +DW  LAA A++ES  +P AR+  G  G+M +T   A+++G
Sbjct: 274 DSRLPKYRDNFVEYAGD--LDWRKLAATAYQESHWNPNARSPTGVRGMMMLTLPTAKQMG 331

Query: 358 VNNIESLDSNVQAGARYLAMIRRKFFASPKLNERERMAFVLAAYNMGPERVQGMRTEAKR 417
           ++N    + +++ GA+YL+ I  +   S  + E +RM F LA+YN+G   V+  R  A+ 
Sbjct: 332 IDNRLDPEQSIRGGAKYLSDILNRLPES--IPENQRMWFALASYNIGYGHVEDARKLAQS 389

Query: 418 RGLNPNQW--------------FFQVERIAMEQVGMGGVSYVNSVNKYY 452
            GLNP+ W              +++  R    + G   V YV+++ +YY
Sbjct: 390 MGLNPSAWRDLKKVLPLLQKRKYYKQTRYGYAR-GSEAVHYVDNIRRYY 437