Pairwise Alignments

Query, 268 a.a., preprotein translocase subunit TatD from Pseudomonas simiae WCS417

Subject, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 20/270 (7%)

Query: 3   LIDIGVNLTNSSFDEKHQAVLDRAYAAGVQQLVLTGTHIEGSEQALELCEKLDESGQRLF 62
           L D   +     F    +  L +A   GV++LV+     +  +   EL ++   +   ++
Sbjct: 22  LFDTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPST---IY 78

Query: 63  STAGIHPH--SASDWNGDSAKRLRGLLSESRVRAVGECGLDFNRDFSPRPQQEKVLEEHL 120
              G HP    AS      A     + +E    AVGECGLD   D      QE++L   L
Sbjct: 79  YALGFHPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMIDVDVA-LQEQMLIAQL 137

Query: 121 ALAVELKLPVFLHERDANQRLLEILKDYRDHLTAAVVHCFTGEQQALFSYLDLDLHIGIT 180
           ++A + KLPV LH R  + RLL++LK  R      V+H F+G  Q    ++DL   IG+ 
Sbjct: 138 SMASQAKLPVILHSRRTHNRLLQLLKQQR-FQQGGVLHAFSGSVQEAQQFVDLGFKIGV- 195

Query: 181 GWICDERRGTHLHPLVREIPRERLMLESDAPYLLPRTLRPKPKNG----RNEPAYLPEVL 236
           G +    R       +  +P E ++LE+DAP +        P NG     N PA L +VL
Sbjct: 196 GGVITYPRANKTRQAIAALPVEHIVLETDAPDM--------PLNGFQGQANHPAQLAKVL 247

Query: 237 REVALHRNESMEDLARHSTACARRFFGLPE 266
             +A  +  S + LA      ++  FGL E
Sbjct: 248 ETLAELKGVSAQYLAPILWQNSQMLFGLCE 277