Pairwise Alignments

Query, 268 a.a., preprotein translocase subunit TatD from Pseudomonas simiae WCS417

Subject, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 9/262 (3%)

Query: 3   LIDIGVNLTNSSFDEKHQAVLDRAYAAGVQQLVLTGTHIEGSEQALELCEKLDESGQRLF 62
           +ID   ++  S FD     V+ RA   G++++++    +      L   +   +      
Sbjct: 1   MIDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDL---CH 57

Query: 63  STAGIHPHSASDWNGDSAKRLRGLLSESRVRAVGECGLDFNRDFSPRPQQEKVLEEHLAL 122
           S  G+HP         +   +    S     AVGE G+D   D + + +QE      L  
Sbjct: 58  SMMGLHPCYVDANVKQTLATIYEWFSRHTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLNW 117

Query: 123 AVELKLPVFLHERDANQRLLEILKDYRDHLTAAVVHCFTGEQQALFSYLDLDLHIGITGW 182
           A EL LPV +H RD+    L +LK  +D     V HCF G      +  DL  H+GI G 
Sbjct: 118 AKELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGIGGV 177

Query: 183 ICDERRGTHLHPLVREIPRERLMLESDAPYLLPRTLRPKPKNGRNEPAYLPEVLREVALH 242
              +  G  +  ++ ++    ++LE+D PYL P   R K    RNEP     +  +VA  
Sbjct: 178 STFKNSG--MDQVIPQLDLNYVILETDCPYLAPVPHRGK----RNEPMLTHLISEKVAQL 231

Query: 243 RNESMEDLARHSTACARRFFGL 264
           R+  + ++ + +   ++  FGL
Sbjct: 232 RSLPLGEVIKITNNNSKALFGL 253