Pairwise Alignments

Query, 268 a.a., preprotein translocase subunit TatD from Pseudomonas simiae WCS417

Subject, 255 a.a., TatD-related deoxyribonuclease (RefSeq) from Shewanella sp. ANA-3

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)

Query: 3   LIDIGVNLTNSSFDEKHQAVLDRAYAAGVQQLVLTGTHIEGSEQALELCEKLDESGQRLF 62
           ++D   +L  + FD   + V+ R   AG+  L++ G      E+ L + E+      + +
Sbjct: 2   MLDTHAHLDFAEFDSDREQVVQRMRQAGIDNLIIPGVSPLHWEKQLAIAEQ-----YQCY 56

Query: 63  STAGIHPHSASDWNGDSAKRLRGLLSE----SRVRAVGECGLD--FNRDFSPRPQQEKVL 116
              GIHP    +    +   L   +S+     R  A+GECGLD  +  ++S   +Q    
Sbjct: 57  FALGIHPWFCPEDVDKAISALTFQVSQLRECPRFVAIGECGLDKLYADNWS---KQLAFF 113

Query: 117 EEHLALAVELKLPVFLHERDANQRLLEILKDYRDHLTAAVVHCFTGEQQALFSYLDLDLH 176
           +  L LA EL LPV +H   A+Q +L  LK ++      V+H F+G       Y+ L   
Sbjct: 114 DAQLTLANELNLPVIVHAVKAHQEVLSHLKRHK-LPKGGVIHAFSGSPDIAAEYIKLGFK 172

Query: 177 IGITGWICDERRGTHLHPLVREIPRERLMLESDAPYLLPRTLRPKPKNGRNEPAYLPEVL 236
           +GI G + +      L   V E+P +  +LE+D+P + P+ +  K    RN+PA     +
Sbjct: 173 LGIGGLVMNP-NAKKLLKTVSELPLDSFLLETDSPAMTPQNVTEK----RNQPANAVLFI 227

Query: 237 REVALHRNESMEDLARHSTACARRFFGL 264
            ++A  + +S   ++ H  + A + F L
Sbjct: 228 DKIATLQKKSSVLISEHLVSNAMQLFDL 255