Pairwise Alignments

Query, 389 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 629 a.a., putative ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)

Query: 185 YRFSKVDAGTNEIMVSTPAGEIYYEY-LSSGFKSCLSILFGIVKEIEYRFAESGIRLDEF 243
           Y   K+D   N+I      GE+ + Y LSSG K  L IL  ++ +            D  
Sbjct: 172 YTRKKIDRRRNDIAFYQD-GELLFPYKLSSGEKQMLVILLTVLVQ------------DNS 218

Query: 244 EGVILIDELELHLHPEWQTKISTILAQAFPNAQFITTTHSPHIIQAAMPNQVVALHYTNG 303
             V+ +DE E  LH EWQ K+ +++ +  PN Q I TTHSP +I     + V  +   + 
Sbjct: 219 HCVLFMDEPEASLHIEWQQKLISMIRELNPNVQIILTTHSPAVIMEGWLDAVTEVSDIST 278

Query: 304 KIERKSLPSSEYGYQGWTVEEVLTDVMGLGDTRTAVYQNA 343
           + +   LP +        V +       L D  T+ Y NA
Sbjct: 279 EADGFRLPPT------INVNDNFYMATSLRDNLTSSYFNA 312