Pairwise Alignments

Query, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 712 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas fluorescens FW300-N1B4

 Score =  229 bits (584), Expect = 2e-64
 Identities = 147/374 (39%), Positives = 210/374 (56%), Gaps = 5/374 (1%)

Query: 125 VLAYAPSLSQVFEERFANYAVAVLILMLAMLGASQLLIRFLLS----QLNTLKDVMLHVE 180
           +LA +  L  V ++      +  +++ +A   A  LLI    S     +N++ +++  + 
Sbjct: 339 LLADSVKLQAVLDDAQQTGTIKAVLVAVAAGLAGLLLIWLTASGVTRPINSVAEMLKAIA 398

Query: 181 K-TGDLSARVPLACKDEVGQMASAFNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEV 239
              GDL+ R+  + KDE+G++ S FN      Q  +  +  +       A + +    + 
Sbjct: 399 SGDGDLTQRLHYSKKDELGELVSWFNRFLDKLQPTIAQIKQSITDARGTADQSSEIARQT 458

Query: 240 QHGMLGQQSETDQAATAINEMTATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSI 299
             GM  Q  E DQ ATA NEM+AT H +A  A    + ++ AD  A  G  ++ R  R I
Sbjct: 459 SEGMQVQFREIDQVATASNEMSATAHDVANSASNAANAAKGADQSARDGMSIIERSTRDI 518

Query: 300 AGLSTGVQQTAVMIQKLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFA 359
             L+  V +    ++ LA +S++I  V+ VI SIAEQTNLLALNAAIEAARAGE GRGFA
Sbjct: 519 NQLAEEVSKAVTEVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFA 578

Query: 360 VVADEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALA 419
           VVADEVRNLAKR Q S +EI  ++  +Q GTR  V  M  S  +A     Q Q+A  AL+
Sbjct: 579 VVADEVRNLAKRTQDSVEEIRIVIERIQTGTRGVVATMHSSQTQAHSNAGQIQQAVQALS 638

Query: 420 EITGAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQLAT 479
           +I+ AV  + + N QIA AAEQQS VAEE+NR V +IR VTE    Q  +SA  S+QL +
Sbjct: 639 KISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAQISSQLNS 698

Query: 480 LAGELSKAIGQLKL 493
           L  +  K + Q ++
Sbjct: 699 LTTQQMKLMDQFRV 712