Pairwise Alignments

Query, 229 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  216 bits (549), Expect = 4e-61
 Identities = 106/228 (46%), Positives = 151/228 (66%), Gaps = 1/228 (0%)

Query: 1   MSQTATILVIDDEPQIRKFLRISLASQGYKVIEAGTGNEGLAQAALSKPDLLVLDLGLPD 60
           M+    IL+I+DE  I++FL + ++   Y+V  A T  +GL   A   P L++LDLGLPD
Sbjct: 1   MNSEIKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPD 60

Query: 61  MDGQQVLREFREWSTVPVLVLSVRASEGQKVEALDGGANDYVTKPFGIQEFLARVRALLR 120
            DG  + RE R W+  P++V+S R  E  KV+ALD GANDY+TKPFG +E +AR+R  LR
Sbjct: 61  QDGISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALR 120

Query: 121 QAPAGEA-QEAALRFGPLTVDLAYRRVLLDGAEVALTRKEYAVLAQLARHPGRVITQQQL 179
            AP+ E+ ++     G L +DL  ++V   G  V LT+ EY +L  LA++ G+V+T +Q+
Sbjct: 121 LAPSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQI 180

Query: 180 LKDIWGPTHTEDSHYLRIVVGHLRQKLADDPTQPRFIVTEAGVGYRLL 227
           LK++WG  + E  HY+RI V  LR K+ D+P QPRFI+TE GVGYRL+
Sbjct: 181 LKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228