Pairwise Alignments

Query, 883 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 2e-47
 Identities = 137/474 (28%), Positives = 217/474 (45%), Gaps = 40/474 (8%)

Query: 415 NISLVFLAAVLLVAVRSSLGPSLVCAALSFLTYDFLFIPPNFSFSIQREEDVLTLLFFLL 474
           +++++FL   +L A       + V   LS + Y +  +P   SF  +  + V+T      
Sbjct: 36  DVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYFLLPDYQSFRFENAQYVITYAVLAF 95

Query: 475 MAALTGNLAARQRRQLQALRDTQEETSELLDLSRKLTAATDRQAVVSAAAHHLEGWSDLD 534
                 N+   QR+Q++  +  Q++  +  +L+  L+A +  + +  A    L     + 
Sbjct: 96  SGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHLSALSTSEDIAQATVKFLSKEKGIV 155

Query: 535 LCLVNRDGQGGWTIE----------------TGGPLTLTEAERAAADWAWQHDQPAGMGT 578
             +     Q  W  +                T    TL + E+  A          G   
Sbjct: 156 SAIALYQPQWQWVAQHADFPVAAIELPQPPLTDNTSTLVQDEQINAFTLVDR----GTIL 211

Query: 579 GTLPFGRWWWWPLSGEEGPLGLLGVSPKPGLELSGQRRRLLTALSQPLAQALARAQLAQE 638
           G + F R+   P      P  L   S     +++   R LLT        +LARA   + 
Sbjct: 212 GVIYFLRY---PHERFASPEALRRES-----KIAPWVRSLLTL-------SLARAHAHRT 256

Query: 639 LESARLHGETEQLRSALLASVSHDLRTPLTSMRGSIDSLLALGEAIPLEDRRELLEGTRD 698
           L       + E  R+ LLASVSHDL+TPL ++ GS  +L      +  E ++ELL    +
Sbjct: 257 LAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAE 316

Query: 699 EAERLDRYIQNLLDMTRLGHGALKLARDWVSPGDIVGSALGRLRAVLAPLKVSTDVPAEL 758
           + ERL+R +  LLD+TR    AL    DWV P +++G+ L RL   L   KV   + ++ 
Sbjct: 317 QGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKV--QIESQP 374

Query: 759 PLLYVHAALIEQALVNVLENAARFSPPQGRLQLSAGVADDQLFFAVADEGPGIPEEERAK 818
            L+ + + LIEQ L+N++ENAA+++P    ++++    + Q   AV D G GIP+E   +
Sbjct: 375 MLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPR 434

Query: 819 IFDMFYTAARGDRGGQGTGLGLAICQGMVGAHGGHISVADGIDGRGTCITLFLP 872
           IFD FY          GTGLGLAICQ +V AH G I V +   G G C T+ +P
Sbjct: 435 IFDRFYRVE--GNHADGTGLGLAICQVIVAAHQGSIRVHNRESG-GACFTVTIP 485