Pairwise Alignments

Query, 883 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

 Score =  532 bits (1370), Expect = e-155
 Identities = 341/891 (38%), Positives = 488/891 (54%), Gaps = 27/891 (3%)

Query: 8   DALLADLPRDGRGRLKVFLGAAPGVGKTYAMLQAAHTQLRQGVKLIAGVVETHGRAETEA 67
           DALLA   +  RG+L VFLGAAPGVGKT+AML  A     +G  ++ G+VETHGR ET A
Sbjct: 15  DALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVETHGRGETAA 74

Query: 68  LLSGLPQQPLLRSEYRGVMLEEMDLDGLLAAKPRLVLVDELAHSNAPGSRHEKRWQDIQE 127
           LL GL   P  +  + G  L E DLD  LA +PR++LVDELAH+N   SRH KR+QDI+E
Sbjct: 75  LLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHPKRYQDIEE 134

Query: 128 LLAAGINVFTTVNVQHLESLNDQVRGITGVQVRETLPDWVLQEADELLLIDLPSRELLER 187
           L+ AGI+V+T +N+QHLESL+D V  I GV VRE +PD VL  AD++LL+DLP  EL+ER
Sbjct: 135 LVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDLPPAELIER 194

Query: 188 LRDGKVYVPEQARAAIDAFFTQTNLMALRELAMQTAAAHVDDDLAQGYRQLGQAAP-AVR 246
           L++GKVY+P+ A+ A D FF   NL ALRELA++  A  VDD +    RQ     P    
Sbjct: 195 LKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNAIEGPWGAA 254

Query: 247 GRLLVGVDGDAQAERLVRHASRVAQRRHLPWSLVHIDNGRARDEQFRLRLQNAQQLAERL 306
            RLLV +  D  +E++VR ASR+A   +  W +V ++   A       +L    +LAE+L
Sbjct: 255 ERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVERAEAESSGAMRQLDETFRLAEQL 314

Query: 307 GGEVVLLRAGEVAKTLIQHAAERRASLVLVGQSRMRWRRRLFGGGLAARLLRNARGLEIN 366
           G E   +   +  + +++ A    A+ +++G  R  +  RLF   L   L   A G+ I+
Sbjct: 315 GAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDALAARAAGIAIH 374

Query: 367 VLDSDDIPA-------PPRLPDVRGLVWFDYALAVVATVVAAAVAWAVSSVLPLPNISLV 419
           ++     PA          LPD  G      A+A      A A+   +   + L NISL+
Sbjct: 375 LVTDGSAPAVKPAARRRSTLPDGWGR---GVAIATGTAAAATALGLLIEQFVVLQNISLL 431

Query: 420 FLAAVLLVAVRSSLGPSLVCAALSFLTYDFLFIPPNFSFSIQREEDVLTLLFFLLMAALT 479
           FL AVL+ A  +    ++  A +S L Y+F FI P  +F++    +V  L  FL  A L 
Sbjct: 432 FLLAVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAEPHEVFALFVFLAAAMLA 491

Query: 480 GNLAARQRRQLQALRDTQEETSELLDLSRKLTAATDRQAVVSAAAHHLEGWSDLDLC-LV 538
           G LA+R R Q +  R     T  L D SRKL+   + + V+ AA   +      +   L+
Sbjct: 492 GGLASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWAAVTQIHATLRRNAALLL 551

Query: 539 NRDG----QGGWTIETGGPLTLTEAERAAADWAWQHDQPAGMGTGTLPFGRWWWWPLSGE 594
             DG       W  +T   LT T A R    WA++  + AG GTGTLP   + + PL   
Sbjct: 552 PEDGDVRLMAAWPPDTELGLTDTMAGR----WAFEKKEAAGNGTGTLPNSPFQFRPLMSP 607

Query: 595 EGPLGLLGV--SPKPGLELSGQRRRLLTALSQPLAQALARAQLAQELESARLHGETEQLR 652
            G +G+ G     KP LE++    R L A+    A A+ RA+L++E        E E+  
Sbjct: 608 HGVVGVFGFLQEDKP-LEIN--EERALAAILDQTAIAVDRARLSRESLDQAAQLEGEKFL 664

Query: 653 SALLASVSHDLRTPLTSMRGSIDSLLALGEAIPLEDRRELLEGTRDEAERLDRYIQNLLD 712
           +ALL+S+SHDLRTPL ++ G++ SL  LGE +  E R +LL+   +E+ RL R++ NLLD
Sbjct: 665 AALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANLLD 724

Query: 713 MTRLGHGALKLARDWVSPGDIVGSALGRLRAVLAPLKVSTDVPAELPLLYVHAALIEQAL 772
           MTR+  G +   RDWV   D+V SA+ R R         T +  +LPL+   + L+ Q +
Sbjct: 725 MTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLPLIRGDSVLLGQVI 784

Query: 773 VNVLENAARFSPPQGRLQLSAGVADDQLFFAVADEGPGIPEEERAKIFDMFYTAARGDRG 832
            N+L+NA RF   +  + +     +D++  +V D G GI   +  ++FD F+   + D  
Sbjct: 785 FNLLDNANRFGGDE-PVSIYGRREEDEIVLSVTDLGKGIAPADLDRVFDKFFRKGKPDGR 843

Query: 833 GQGTGLGLAICQGMVGAHGGHISV-ADGIDGRGTCITLFLPLPTQPGLERE 882
             GTGLGL+I +G V A  G I   +  +  RGT I++  P+      E+E
Sbjct: 844 SLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPVAETGITEKE 894