Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 192 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 13/180 (7%)

Query: 9   SDEALLARYRTGDSAAFEALYARHRQGLYRFLVSLSNKAELAEEIYQETWLSL--IRSAT 66
           +DE L+AR R GD AA+ AL  RH +  Y     +S     AE+I Q+ +L +   R   
Sbjct: 8   TDEVLMARIRAGDQAAYRALVHRHLKRAYALARRMSGSDAEAEDIAQDAFLQVWQRRDHW 67

Query: 67  QPQGRASFRTWLFQIARNRLIDHWRKHGIHNPLHDSYDEQLHAQADDSAGPEQQLSLSRD 126
             +G A F TWL+++  NR IDH R+     P  +  D     +  D A P+    + R 
Sbjct: 68  TDEG-AKFTTWLYRVVLNRCIDHKRR-----PAGEDLDSV--PEPPDHA-PDAVTHIQRR 118

Query: 127 Q--ARLDAALQGLPEDQREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQKLRRLL 184
           Q  ARL  A   LP+ QR    L  +  L   ++A +    +  V+S L+ A+Q+LR LL
Sbjct: 119 QVAARLRDAQDRLPQQQRAALALYYNEGLSGAEVATIMQISVTAVESLLKRARQQLRTLL 178