Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Dechlorosoma suillum PS

 Score = 76.3 bits (186), Expect = 3e-19
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 10/185 (5%)

Query: 10  DEALLARYRTGDSAAFEALYARHRQGLYRFLVSLSNKAELAEEIYQETWLSLIRSATQPQ 69
           D+ L+ R ++GD  AFE L A++++ L R L          E++ QE ++   R+    +
Sbjct: 7   DQKLVERAQSGDKKAFELLVAKYQRKLGRLLSRFIRDPAEVEDVAQEAFIKAYRALPSFR 66

Query: 70  GRASFRTWLFQIARNRLIDHWRKHGIHNPLHDSYDEQLHAQADDSA------GPEQQLSL 123
           G ++F TWL++I  N   ++    G   P    +D +     DD         PE  L  
Sbjct: 67  GDSAFYTWLYRIGINTAKNYLVAQGRRAPTSTEFDSEEAETFDDGEQLRDINTPENLLLS 126

Query: 124 SRDQARLDAALQGLPEDQREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQ----K 179
            +    ++AA+  LPE+ R   +LR    L   +IA +   P+ T++SR+  A++    K
Sbjct: 127 KQIGETVNAAMDALPEELRTAIMLRELEGLSYEEIAKIMDCPIGTIRSRIFRAREAVATK 186

Query: 180 LRRLL 184
           LR LL
Sbjct: 187 LRPLL 191