Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 179 a.a., RNA polymerase sigma factor from Cupriavidus basilensis FW507-4G11

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 5/165 (3%)

Query: 25  FEALYARHRQGLYRFLVSLSNKAELAEEIYQETWLSLIRSATQPQGRASFRTWLFQIARN 84
           FE L   H    +     L++  + A+++ QE +L   R      G  + R WL  I RN
Sbjct: 10  FETLLLPHMNSAFNVARWLTHNDQDAQDVVQEAYLRAFRFFGGFHGEDA-RAWLLSIVRN 68

Query: 85  RLIDHWRKHGIHNPLHDSYDEQLHAQ----ADDSAGPEQQLSLSRDQARLDAALQGLPED 140
                 +++  H      ++E + +     AD    PE  L  S++Q R+  AL+GL  +
Sbjct: 69  TFYTWHQQNRGHAAQTMMFEEDMDSLETSVADHDDSPEAMLIRSQNQKRVHKALRGLRLE 128

Query: 141 QREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQKLRRLLA 185
            REV +LR   DL   +IAA+ G P+ TV SRL   +Q+L  LLA
Sbjct: 129 YREVVVLRELEDLSYKEIAAIVGIPIGTVMSRLGRGRQQLAALLA 173