Pairwise Alignments

Query, 561 a.a., 30S ribosomal protein S1 from Pseudomonas simiae WCS417

Subject, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

 Score =  791 bits (2044), Expect = 0.0
 Identities = 401/556 (72%), Positives = 461/556 (82%), Gaps = 3/556 (0%)

Query: 1   MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAG 60
           M+ESFA+LFEE L     Q G+I+ G +V I+    +V V AGLKSE+ IP EQF N AG
Sbjct: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENG--YVLVDAGLKSESAIPAEQFKNAAG 58

Query: 61  DLTINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG 120
           +L + VG +V VALD+VEDGFGET+LSREKAKR E WIVLE A+     V G+INGKVKG
Sbjct: 59  ELEVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKG 118

Query: 121 GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN 180
           GFTV++NGIRAFLPGSLVDVRP+RDT HLE KELEFKVIKLDQKRNNVVVSRR+V+E+E+
Sbjct: 119 GFTVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESES 178

Query: 181 SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG 240
           S ER+ LLE+LQEG +VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR+KHPSEIVNVG
Sbjct: 179 SVERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238

Query: 241 DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE 300
           DEI VKVLK+DR+R RVSLGLKQLGEDPWVAI  RYPE  +++ RVTNLTDYGCF E+EE
Sbjct: 239 DEILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEE 298

Query: 301 GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS 360
           GVEGLVHVSEMDWTNKNIHPSKVV VGDEVEVMVLDIDEERRRISLG+KQCK+NPW+ F+
Sbjct: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFA 358

Query: 361 GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV 420
               KGDK++G IKSITDFGIFIGL+GGIDGLVHLSDISWN  GEEAVR FKKGDE+  V
Sbjct: 359 EAQAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAV 418

Query: 421 ILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGTVKEVDAKGAIIVLADDIEATL 480
           +L+VD ERERISLGIKQ+E+DPF+ YV +N KGA+V GTV  VDAKGA I L D +E  +
Sbjct: 419 VLAVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYI 478

Query: 481 KASEISRDRVEDARNVLKEGQEVEAKIISVDRKSRVIQLSIKSKDEVEEKEAIQSLKSAP 540
           +ASE+SRDR+EDA  +L  G +VEAK   VDRK+RVI LSIK+KDE EE+E + +L    
Sbjct: 479 RASEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQD 538

Query: 541 EAAPGETTMASLLREA 556
           EAA G   MA   + A
Sbjct: 539 EAAFG-NAMADAFKAA 553