Pairwise Alignments

Query, 884 a.a., DNA gyrase subunit A from Pseudomonas simiae WCS417

Subject, 901 a.a., DNA gyrase subunit A (RefSeq) from Shewanella amazonensis SB2B

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 594/902 (65%), Positives = 721/902 (79%), Gaps = 32/902 (3%)

Query: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
           M +LA  I P+NIEDELK SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+EL NDWN
Sbjct: 1   MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
           KPYKKSARVVGDVIGKYHPHGD+AVYDTIVRMAQPFSLRY LVDGQGNFGS+DGD AAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM 120

Query: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
           RYTE+RM KLAHELLADL KETVD+VPNYDGTE IPAV+PTKIPNLLVNG+SGIAVGMAT
Sbjct: 121 RYTEIRMEKLAHELLADLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
           NIPPHNL EV+ GCLALI+ PEL++++LM+YIPGPDFPTAAIING+ GI EAYRTGRG+ 
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPELSIEQLMEYIPGPDFPTAAIINGKKGIEEAYRTGRGKA 240

Query: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
            MRAR+ +E  D   GR++I++TE+PYQ+NKARLIEKIAELVK+KK+EGI+ LRDESDKD
Sbjct: 241 IMRARAEVEIEDN--GRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKD 298

Query: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
           GMR+VIE++RGEV EV+LNNLYAQTQ+QS FGIN+VAL +G+P++ NLK++LEAF+ HRR
Sbjct: 299 GMRIVIEIKRGEVGEVVLNNLYAQTQMQSSFGINMVALANGQPKLFNLKEMLEAFILHRR 358

Query: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
           EVVTRRTV+ELRKAR+R HILE  AVAL+NIDP+IALIKAS +PS+AK  LI+  WE   
Sbjct: 359 EVVTRRTVYELRKARDRAHILEALAVALANIDPIIALIKASASPSDAKAGLIAKGWELGT 418

Query: 421 VVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ 480
           V AM+E+AG D+ RPE L+P++G+R+G YF++  QAQAIL+LRLH+LTGLEHEK+L EY+
Sbjct: 419 VKAMLEKAGDDAARPEWLEPEFGIRDGLYFMTEPQAQAILDLRLHKLTGLEHEKILQEYE 478

Query: 481 EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER 540
           E+L  I  L+ IL S  RLMEVI+EELE+I  ++GD RRTEI  + +D++L D+I EE+ 
Sbjct: 479 ELLEIIAGLLHILRSPERLMEVIKEELELILEQFGDNRRTEINASAVDISLEDLINEEDV 538

Query: 541 VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV 600
           VVT+SH GYAK QPL  YQAQRRGGKGK+AT VKDED++  LLVAN+H T+L FS  GK+
Sbjct: 539 VVTLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKL 598

Query: 601 YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP 660
           YWLK Y++P ASR ARGRP+VNLLPL   E IT +LPV EY EG +I MAT+ GTVKKT 
Sbjct: 599 YWLKVYQLPLASRQARGRPIVNLLPLQEGERITAILPVREYEEGKYILMATSHGTVKKTA 658

Query: 661 LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD--------- 711
           L  +SR RS G+IA+ L +GD LI   ITDG  E+MLFSD GKV RFKE +         
Sbjct: 659 LTEYSRPRSNGIIAVNLKDGDQLIGVDITDGSSEIMLFSDAGKVVRFKEGEEVAVVDENG 718

Query: 712 ----------------VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGK 755
                           VR MGR A GVRG+ L EGQ+++S+++P++ S ILT +  G+GK
Sbjct: 719 NPVLDEEGKPQINFKGVRPMGRGATGVRGIALEEGQRVVSLIVPKDDSAILTVTANGFGK 778

Query: 756 RTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSS 815
           RT ++E+P   R  +GV+++   +RNG +VGAVQV + +EIMLISD+GTLVRT    VS 
Sbjct: 779 RTELAEYPAKSRATKGVVSIKVTERNGPVVGAVQVGENDEIMLISDKGTLVRTPAIGVSI 838

Query: 816 LGRNTQGVTLIKLAKDEKLVGLERVQEPSEVEGEELEG--EEFEGEVIAAGDDNVDEPTL 873
           +GRNTQGVT+I+ A DE +VGL+R+ E  +   E LE   E  EG++IA  D    +PT 
Sbjct: 839 IGRNTQGVTIIRTADDETVVGLQRIDEIQDDGSEYLEEGVEGAEGDIIAEAD---TQPTD 895

Query: 874 DA 875
           DA
Sbjct: 896 DA 897