Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  188 bits (477), Expect = 5e-52
 Identities = 150/518 (28%), Positives = 233/518 (44%), Gaps = 35/518 (6%)

Query: 8   LLAAATLTAWSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFAN-VYDTLVRVD 66
           LL A TL      A  AQAA  L          FDP +     D    A  V++ L +  
Sbjct: 9   LLLALTLAT---IAPFAQAATTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFK 65

Query: 67  NLGTKMEPGLAESWDISKDGLTYTFKLRDAK-------FSDGSAITADDAAFSLLRIRD- 118
             GT++EPGLA SW++SKDGLTYTF LRD         F+      A+D  F+  R+ D 
Sbjct: 66  RGGTEVEPGLATSWEVSKDGLTYTFHLRDGVKFHTTDYFTPSRDFNANDVLFTFQRLLDP 125

Query: 119 ----NKASLWADPF-------NLINTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSE 167
                KA     P+         I +    D  T+  +L     AF+  LA    SI S 
Sbjct: 126 ENPFRKAYPTESPYFTDMDLNTTIKSVDKLDEHTVRFSLNNIDAAFVQNLAMSFASIQSA 185

Query: 168 KAMTKMGEDA----YSENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSV 223
           +   K+ ++      ++ PV +G F    ++K  ++    N  +W+ ++V LD + +   
Sbjct: 186 EYADKLLKEGKAADLNQKPVGTGPFVFKRYQKDSQIRYSANRAYWKPEDVKLDNLIFSIT 245

Query: 224 TDDNTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKP 283
            D   R++ ++  E   + +   + +E +++D N+ +          L  N  H  L + 
Sbjct: 246 PDAAVRLQKLKTGECQVSGYPRPADIEVMEQDPNLRVLKQAGFNLGFLAYNVSHPPLDQL 305

Query: 284 EVRQALDMAIDKQSLVKTATYGQGTVAYSYIPKGSLYHYANNLQRPYDPTAAKKLLEQAG 343
           +VRQALDMAIDK +++K      G +A + +P     +       PYDPT AK LL++AG
Sbjct: 306 KVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALLKEAG 365

Query: 344 AK-----DLKLNYVVNAGNEADEQIAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYD 398
                  +L    V  A N      A +I+   AKVG+TAN+   +  +  +   +GE+D
Sbjct: 366 VAPGTTINLWAMTVQRASNPNARMSAQMIQQDWAKVGITANIVSYEWGEYIKRAKNGEHD 425

Query: 399 ISVMYWTNDILDPDQ--KTTFVLGHDTNQNYMTRYKNDKVKALVAQARIEADPVKREQMY 456
             +  WT D  DPD      +        NY  ++ +     LV QA++  D  +R ++Y
Sbjct: 426 AMIYGWTGDNGDPDNWLGVLYSCAAVKGSNY-AKWCDPAYDKLVQQAKVSTDRDERVKLY 484

Query: 457 VELQKLAKQDVNWIDLYYSPYINISRKNVSNFLQNPLG 494
            + QK+ KQ V    +  S      RK VS+F  +P G
Sbjct: 485 QQAQKILKQQVPITPIANSTVFQPLRKEVSDFKISPFG 522