Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 500 a.a., putative peptide transporter subunit: periplasmic-binding component of ABC superfamily from Azospirillum brasilense Sp245

 Score =  168 bits (426), Expect = 4e-46
 Identities = 137/503 (27%), Positives = 237/503 (47%), Gaps = 18/503 (3%)

Query: 7   KLLAAATLTAWSL--TAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVR 64
           +L+A A L+A+ L  TA  AQAAG L +    +  T DP K    ++      +++ L  
Sbjct: 4   RLVARAVLSAFLLSGTALSAQAAGTLKVAVDSNLNTLDPAKMKGGQEYVAAYLLFNGLTA 63

Query: 65  VDNLGTKMEPGLAESWDISKDGLTYTFKLRDA-KFSDGSAITADDAAFSLLRIRDNKASL 123
           +    T ++P LAE W+ S D  T+TF L+   KF  G  + A+D   ++ RI+D     
Sbjct: 64  IAADMT-LKPDLAERWEHSADLKTWTFFLKKGVKFHSGREMDAEDVLATITRIQDKATGS 122

Query: 124 WADP-FNLINTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDAYSENP 182
            A   F ++ + KA D  T+  TLK+P   F          I+        G D  + NP
Sbjct: 123 TARVNFEIVESMKAVDSHTVEFTLKSPYSGFAELFGERQARIVPRD-----GLDTLASNP 177

Query: 183 VTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNNELDTAI 242
           V +G F    +  GDR+++K+NP +++A    LD V    + +  +++  +   ELD A 
Sbjct: 178 VGTGPFQFVSFAPGDRMVVKRNPTYFEAGLPKLDEVVIRILPETASQVAALTTGELDLAW 237

Query: 243 FVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVRQALDMAIDKQSLVKTA 302
            +P   V+++K   N+   A P++  D +++N          VR+A+  A+DKQ++ + A
Sbjct: 238 NLPPEAVDKVKATSNLKAEAVPTSTWDGVIMNGTTKPFDDVRVRRAVATALDKQAITQIA 297

Query: 303 TYGQGTVAYSYIPKGSLYHYANNLQRPYDPTAAKKLLEQAG-AKDLKLNYVVNAGNEADE 361
            +G GT  +S IP    Y   +      DP AAKK+L +AG     ++     AG    E
Sbjct: 298 LFGYGTPTHSPIPPSHPYFNKDLAIAKGDPAAAKKMLAEAGYPNGFEVTLYTPAGRATRE 357

Query: 362 QIAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWTNDILDPDQKTTFVLGH 421
           ++ + +++ L   G+T N+Q+V P   +   ++G+   +  Y       P   T+    +
Sbjct: 358 RLGLAVRELLKPAGITVNVQRV-PFDVFLKDIEGK---AGFYIDGFFSRPTIDTSVYPWY 413

Query: 422 DTNQNY---MTRYKNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNWIDLYYSPYI 478
            +  ++   +  Y N  +  L+  AR  +   + +++Y E+Q LA QD   +  Y   ++
Sbjct: 414 HSRGSWNAALWNYSNPAMDKLLDGARQASSEEEAKKLYGEVQALAVQDAPGVIPYVINHV 473

Query: 479 NISRKNVSNFLQNPLGRFTLEEV 501
           N     V  F  +P+    L  V
Sbjct: 474 NGVSARVQGFTSHPMMFLDLRNV 496