Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  185 bits (470), Expect = 3e-51
 Identities = 143/492 (29%), Positives = 218/492 (44%), Gaps = 40/492 (8%)

Query: 6   LKLLAAATLTAWSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVRV 65
           + L A A   A +  A       VL +G   +  + DP       D  +  NVYD LVR 
Sbjct: 9   IALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGLVRF 68

Query: 66  DNLGTKMEPGLAESWDISKDGLTYTFKLRD-AKFSDGSAITADDAAFSLLRIRDNKASLW 124
            +   ++EP LAESW IS DG TYTF LR   KF DGS   A+   F+  R+       +
Sbjct: 69  KDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDHPFY 128

Query: 125 -ADPFNL------INTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDA 177
              PF L      +      D  T+   L      FLS LA PT  I+S  A+ K G++ 
Sbjct: 129 DTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKHGKE- 187

Query: 178 YSENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNNE 237
           Y  +P  +G F   EW    RV++++NP++W +    L  V +  +TD NTR+  +    
Sbjct: 188 YGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSA-AKLQAVVFRPITDANTRVAEMMAGG 246

Query: 238 LDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVRQALDMAIDKQS 297
           +D  + VP   +   ++D N  +           ++N + G  A   VRQA + A++KQ+
Sbjct: 247 IDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQAANYAVNKQT 306

Query: 298 LVKTATYGQGTVAYSYIPKGSLYHYANNLQRPY--DPTAAKKLLEQAGAKDLKLNYVVNA 355
           LV     G  TVA   IP    +++  +   PY  DP  AK LL +AG ++ ++ + V  
Sbjct: 307 LVDDVLRGTATVAAGPIPPA--FNWVESSVEPYAHDPEKAKALLAEAGVENPQVTFYVTE 364

Query: 356 GNEA---DEQIAVIIKDQLAKVGVTANLQKVDPTQSWQML-------VDGEYDISVMYWT 405
           G         +   I+  L  VG    ++    T  W          ++G+ D++ M W 
Sbjct: 365 GGSGMLDPITMGAAIQADLQAVGFKVKIE----TYEWNTFLGRVNPGLEGKADMAEMAWM 420

Query: 406 NDILDPDQKTTFVLGHDT-------NQNYMTRYKNDKVKALVAQARIEADPVKREQMYVE 458
            +  DPD      L  D        N  Y   Y N ++  L+ +AR   D  +R ++Y E
Sbjct: 421 TN--DPDTVPYLTLRTDAMPDKGGFNSGY---YSNPQLDELLEKARRSTDQAERGKLYGE 475

Query: 459 LQKLAKQDVNWI 470
           +Q +   D  W+
Sbjct: 476 VQSIVHDDAPWL 487