Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 526 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  177 bits (448), Expect = 1e-48
 Identities = 142/493 (28%), Positives = 224/493 (45%), Gaps = 17/493 (3%)

Query: 14  LTAWSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVRV---DNLG- 69
           L+  S     A    +L IG   D  T DP  +  N D  V    Y  LV+    D  G 
Sbjct: 25  LSGLSFATQAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPAYQRLVQYKTEDGKGS 84

Query: 70  TKMEPGLAESWDISKDGLTYTFKLRD-AKFSDGSAITADDAAFSLLRI-RDNKASLWADP 127
           T++E  LA SW  S D L +TFKL+  AKF DGS + AD   +S  R+ +  +    A P
Sbjct: 85  TQVEGDLAASWTASPDQLVWTFKLKPGAKFDDGSDVNADAVKWSFERLMKIGQGPSEAFP 144

Query: 128 FNLINTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKM-----GEDAYSENP 182
            ++  T    DP T+  TLKTP   FL  LA+    I++  A+ K      G+   + + 
Sbjct: 145 KDM--TVTVVDPMTVTFTLKTPFAPFLYTLANDGAGIVNP-AIAKANPADEGKAWLAGHT 201

Query: 183 VTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNNELDTAI 242
             SG + +D W+KG +++L  NP++   K  +   V    + +  TR   +   +LD A 
Sbjct: 202 AGSGPYKLDRWQKGQQLVLVPNPHYSGTKP-AFKRVTVKIIGESATRRLQLSRGDLDIAD 260

Query: 243 FVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVRQALDMAIDKQSLVKTA 302
            +P  ++  LKK+  V +   PS R  +L +N+    L + ++R+A+  A+D Q +VK  
Sbjct: 261 SLPMDQLAALKKENKVAVEEFPSLRVTYLYLNNGKTPLNQVDLRRAISSAVDYQGMVKGI 320

Query: 303 TYGQGTVAYSYIPKGSLYHYANNLQRPYDPTAAKKLLEQAGAKDLKLNYVVNAGNEADEQ 362
             G        IP G         Q   D T AK  LE+   K   L+++ +  +   E 
Sbjct: 321 LGGNAKQMRGPIPDGMWGFDPTAKQYTLDLTQAKADLEKVKDKPQTLDFLYSDNDPNWES 380

Query: 363 IAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWTNDILDPDQKTTFVLGHD 422
           IA+ ++  L + G+   L+K+        +  G+YDIS+  W+ D  DP     +    D
Sbjct: 381 IALSVQASLGQAGINVKLEKLANATMRDRIGQGDYDISIGNWSPDFADPYMFMNYWFESD 440

Query: 423 TN--QNYMTRYKNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNWIDLYYSPYINI 480
                   + Y N  V AL+ +A    D  +R   Y + QK+   +  ++ L+   Y   
Sbjct: 441 KKGLPGNRSFYSNPDVDALLKKAVSVTDQKQRTDYYQQAQKIVIDEAAYVYLFQKNYQVA 500

Query: 481 SRKNVSNFLQNPL 493
             K+V  F+ NP+
Sbjct: 501 MNKDVKGFVFNPM 513